Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05167 and BSU34170

See DNA alignment / Visit BSNT_05167 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:48
# Commandline: needle
#    -asequence pep-align/BSNT_05167___lacR.1.22522.seq
#    -bsequence pep-align/BSU34170___ganR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05167___lacR-BSU34170___ganR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05167___lacR-BSU34170___ganR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05167___lacR
# 2: BSU34170___ganR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 332
# Identity:     330/332 (99.4%)
# Similarity:   330/332 (99.4%)
# Gaps:           2/332 ( 0.6%)
# Score: 1687.0
# 
#
#=======================================

BSNT_05167___      1 MATIKDIAQEAGFSISTVSRVLNNDESLSVPDETREKIYEAAEKLNYRKK     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34170___ga      1 MATIKDIAQEAGFSISTVSRVLNNDESLSVPDETREKIYEAAEKLNYRKK     50

BSNT_05167___     51 TVRPLVKHIAFLYWLTDKEELEDVYFKTMRLEVEKLAKAFNVDMTTYKIA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34170___ga     51 TVRPLVKHIAFLYWLTDKEELEDVYFKTMRLEVEKLAKAFNVDMTTYKIA    100

BSNT_05167___    101 DGIESIPEHTEGFIAVGTFSDEELAFLRNLTENGVFIDSTPDPDHFDSVR    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34170___ga    101 DGIESIPEHTEGFIAVGTFSDEELAFLRNLTENGVFIDSTPDPDHFDSVR    150

BSNT_05167___    151 PDLAQMTRKTVNILTEKGHKSIGFIGGTYKNPNTNQDEMDIREQTFRSYM    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34170___ga    151 PDLAQMTRKTVNILTEKGHKSIGFIGGTYKNPNTNQDEMDIREQTFRSYM    200

BSNT_05167___    201 REKAMLDERYIFCHRGFSVENGYRLMSAAIDTLGDQLPTAFMIAADPIAV    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34170___ga    201 REKAMLDERYIFCHRGFSVENGYRLMSAAIDTLGDQLPTAFMIAADPIAV    250

BSNT_05167___    251 GCLQALNEKGIAIPNRVSIVSINNISFAKYVSPPLTTFHIDIHELCKNAV    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34170___ga    251 GCLQALNEKGIAIPNRVSIVSINNISFAKYVSPPLTTFHIDIHELCKNAV    300

BSNT_05167___    301 QLLLEQVQDKRRTVKTLYVGAELIVRKSMNEG    332
                     ||||||||||||||||||||||||||||||  
BSU34170___ga    301 QLLLEQVQDKRRTVKTLYVGAELIVRKSMN--    330


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