Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05274 and BSU34630

See DNA alignment / Visit BSNT_05274 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:56
# Commandline: needle
#    -asequence pep-align/BSNT_05274___yvdE.1.22522.seq
#    -bsequence pep-align/BSU34630___mdxR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05274___yvdE-BSU34630___mdxR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05274___yvdE-BSU34630___mdxR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05274___yvdE
# 2: BSU34630___mdxR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 316
# Identity:     315/316 (99.7%)
# Similarity:   316/316 (100.0%)
# Gaps:           0/316 ( 0.0%)
# Score: 1589.0
# 
#
#=======================================

BSNT_05274___      1 MATLSDVAKKANVSKMTVSRVINHPETVTDELKKLVHSAMKELNYIPNYA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34630___md      1 MATLSDVAKKANVSKMTVSRVINHPETVTDELKKLVHSAMKELNYIPNYA     50

BSNT_05274___     51 ARALVQNRTQVVKLLILEEMDTTEPYYMNLLTGISRELDRNHYALQLVTR    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34630___md     51 ARALVQNRTQVVKLLILEEMDTTEPYYMNLLTGISRELDRNHYALQLVTR    100

BSNT_05274___    101 NSLNIGQCDGIIATGLRKNDFEGVIKAFEKPLVVFGQNEMGYDFIDVNNE    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34630___md    101 NSLNIGQCDGIIATGLRKNDFEGVIKAFEKPLVVFGQNEMGYDFIDVNNE    150

BSNT_05274___    151 KGTFMATRHVMGLGEREVVFFGIDLDEPFERAREQGYIRAMNKSFKKSNV    200
                     |||||||||||||||||||||||||||||||||||||||||||||||||:
BSU34630___md    151 KGTFMATRHVMGLGEREVVFFGIDLDEPFERAREQGYIRAMNKSFKKSNM    200

BSNT_05274___    201 FRIDNSSKKSECLARELLKSMDNQAAFVCASDRIALGVIRAAQSLGKRIP    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34630___md    201 FRIDNSSKKSECLARELLKSMDNQAAFVCASDRIALGVIRAAQSLGKRIP    250

BSNT_05274___    251 EDVAVTGNDGVFLDRISSPRLTTVRQPVVEMGEACAKMLLKKMNEDGAAQ    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34630___md    251 EDVAVTGNDGVFLDRISSPRLTTVRQPVVEMGEACAKMLLKKMNEDGAAQ    300

BSNT_05274___    301 GSLFFEPELIVRESTL    316
                     ||||||||||||||||
BSU34630___md    301 GSLFFEPELIVRESTL    316


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