Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05315 and BSU34940

See DNA alignment / Visit BSNT_05315 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:02
# Commandline: needle
#    -asequence pep-align/BSNT_05315___yvpB.1.22522.seq
#    -bsequence pep-align/BSU34940___yvpB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05315___yvpB-BSU34940___yvpB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05315___yvpB-BSU34940___yvpB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05315___yvpB
# 2: BSU34940___yvpB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 250
# Identity:     249/250 (99.6%)
# Similarity:   250/250 (100.0%)
# Gaps:           0/250 ( 0.0%)
# Score: 1303.0
# 
#
#=======================================

BSNT_05315___      1 MKTLRTLCVLMILSGVIFFGLKIDAKDIDIPFLNSLKKVVSDSDTDSAAN     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34940___yv      1 MKTLRTLCVLMILSGVIFFGLKIDAKDIDIPFLNSLKKVVSDSDTDSAAN     50

BSNT_05315___     51 SKKELKGSAKPLDVILYNQMDAPRLYNGCEVTSLAMVLNYAGYDVTKNTL    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34940___yv     51 SKKELKGSAKPLDVILYNQMDAPRLYNGCEVTSLAMVLNYAGYDVTKNTL    100

BSNT_05315___    101 ANQIATVPLTYSSGLKGDPNDGFVGDMANGPGLGVYHRPIYQLAKTYAGD    150
                     |||:||||||||||||||||||||||||||||||||||||||||||||||
BSU34940___yv    101 ANQVATVPLTYSSGLKGDPNDGFVGDMANGPGLGVYHRPIYQLAKTYAGD    150

BSNT_05315___    151 KVSDLTGKSISAVYQQLEKGNPVWVITTANFTPVDNMQTWKTPNGTIEIT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34940___yv    151 KVSDLTGKSISAVYQQLEKGNPVWVITTANFTPVDNMQTWKTPNGTIEIT    200

BSNT_05315___    201 YSEHSVAVTGYDDKYVYLNDPYGYKNRKTDRTSFEKAWKQMGSQAVVIQK    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34940___yv    201 YSEHSVAVTGYDDKYVYLNDPYGYKNRKTDRTSFEKAWKQMGSQAVVIQK    250


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.