Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05429 and BSU35640

See DNA alignment / Visit BSNT_05429 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:18
# Commandline: needle
#    -asequence pep-align/BSNT_05429.1.22522.seq
#    -bsequence pep-align/BSU35640___lytA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05429-BSU35640___lytA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05429-BSU35640___lytA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05429
# 2: BSU35640___lytA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 119
# Identity:      42/119 (35.3%)
# Similarity:    56/119 (47.1%)
# Gaps:          18/119 (15.1%)
# Score: 176.5
# 
#
#=======================================

BSNT_05429         1 MEFVDKKGEVKKMKKLIVLTLSMLLLLSACGTSGQSEDKLSSGNKNAASE     50
                                 |||.|.| |..:||||.||.:.|.    |.|...:...
BSU35640___ly      1 ------------MKKFIAL-LFFILLLSGCGVNSQK----SQGEDVSPDS     33

BSNT_05429        51 ETITKEGSFAGLADSHTIAVNIDGKETTLQIDEDLQEKVNSIEEGKKVEV    100
                     ...||||::.||||:|||.|.:|.:..:|.|.|:....::....|.||.:
BSU35640___ly     34 NIETKEGTYVGLADTHTIEVTVDNEPVSLDITEESTSDLDKFNSGDKVTI     83

BSNT_05429       101 QYTKVENGVLELKSIEIK-    118
                     .|.|.:.|.|.||.||.. 
BSU35640___ly     84 TYEKNDEGQLLLKDIERAN    102


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