Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05447 and BSU35700
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:19
# Commandline: needle
# -asequence pep-align/BSNT_05447.1.22522.seq
# -bsequence pep-align/BSU35700___tagH.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05447-BSU35700___tagH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05447-BSU35700___tagH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05447
# 2: BSU35700___tagH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 528
# Identity: 256/528 (48.5%)
# Similarity: 267/528 (50.6%)
# Gaps: 226/528 (42.8%)
# Score: 1282.0
#
#
#=======================================
BSNT_05447 1 MKLKVSFRNVSKQYQLYEKQSDKIKGLFFPNKDKSFFAVRNVSFDVYEGE 50
||||||||||||||.||:||||||||||||.||..|||||||||||||||
BSU35700___ta 1 MKLKVSFRNVSKQYHLYKKQSDKIKGLFFPAKDNGFFAVRNVSFDVYEGE 50
BSNT_05447 51 TIGFVGINGSGKSTMSNLLAKIIPPTSGEIEMNGQPSLIAISAGLNNALT 100
|||||||||||||||||||||||||||||||||||||||||:|||||.||
BSU35700___ta 51 TIGFVGINGSGKSTMSNLLAKIIPPTSGEIEMNGQPSLIAIAAGLNNQLT 100
BSNT_05447 101 GRDNIRLKCLMMGLTNKEIDEMYDSIVEFAEIGEFINQPVKSYSSGMKSR 150
||||:|||||||||||||||:||||||||||||:|||||||:||||||||
BSU35700___ta 101 GRDNVRLKCLMMGLTNKEIDDMYDSIVEFAEIGDFINQPVKNYSSGMKSR 150
BSNT_05447 151 LGFAISVHIDPDILIIDEALSVGDQTFYDKCVDRITEFKNQGKTIFFVSH 200
||||||||||||||||||||||||||||.||||||.|||.||||||||||
BSU35700___ta 151 LGFAISVHIDPDILIIDEALSVGDQTFYQKCVDRINEFKKQGKTIFFVSH 200
BSNT_05447 201 SIGQIEKICDRVAWIDNGELRMFDDTKTVVKEYKEFISWFKKLSIKEKDK 250
|||||||:||||||:..|||||||:|||||||||.||.||.|||.|||:.
BSU35700___ta 201 SIGQIEKMCDRVAWMHYGELRMFDETKTVVKEYKAFIDWFNKLSKKEKET 250
BSNT_05447 251 YKKEQLASRKKVLSEEDLAHPEKEKKKQKSLANIIPIAGLSILLVLAAGA 300
|||||...|||. ..|..|...|:|||.|||||.|.||.||||.|..||.
BSU35700___ta 251 YKKEQTEERKKE-DPEAFARFRKKKKKPKSLANAIQIAILSILTVFMAGT 299
BSNT_05447 301 MFV----------------------------------------------- 303
||.
BSU35700___ta 300 MFFNAPLRTIASFGAIPQNEVKNHHGDAKGKSEERLTAINKQGFIANEKA 349
BSNT_05447 303 -------------------------------------------------- 303
BSU35700___ta 350 AAYKDQGLKQKADVTLPFGTKVTVAAKGKQAAKIKFDGHSYYVKQSAVAT 399
BSNT_05447 303 -------------------------------------------------- 303
BSU35700___ta 400 NMKHAELHATAFTSYVSQNAASSYEYFLKFLGDSSTSIQSKLNGYTEGNK 449
BSNT_05447 303 -------------------------------------------------- 303
BSU35700___ta 450 ADGRKTLNFDYEKISYVLENDKATELIFHNISPINPASLSLSDSDVLYDS 499
BSNT_05447 303 ---------------------------- 303
BSU35700___ta 500 SKKRFLVNTDDQVFAVDNEEHTLTLMLK 527
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