Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05465 and BSU35840
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:22
# Commandline: needle
# -asequence pep-align/BSNT_05465___ywtF.1.22522.seq
# -bsequence pep-align/BSU35840___ywtF.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05465___ywtF-BSU35840___ywtF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05465___ywtF-BSU35840___ywtF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05465___ywtF
# 2: BSU35840___ywtF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 328
# Identity: 235/328 (71.6%)
# Similarity: 274/328 (83.5%)
# Gaps: 6/328 ( 1.8%)
# Score: 1209.5
#
#
#=======================================
BSNT_05465___ 1 MEERLQHKKKKRRLKKWVKFTIGLFAILIIVTGSIGTYAYIKLNNASKQA 50
||||.|.:||||:||||||...||.|.|:|..||:|.||::|||||||:|
BSU35840___yw 1 MEERSQRRKKKRKLKKWVKVVAGLMAFLVIAAGSVGAYAFVKLNNASKEA 50
BSNT_05465___ 51 HIDLNENGQSVKRIKEFDPKKDSFTVLLLGIDSRNSKGETVDDARSDANV 100
|:.|....|||||||||||.||||:|||||||:|...|||||.|||||||
BSU35840___yw 51 HVSLARGEQSVKRIKEFDPGKDSFSVLLLGIDAREKNGETVDQARSDANV 100
BSNT_05465___ 101 LVTFNRKNKSATMLSIPRDSYVNIPGYGYDKFTHAHAYGGVKLSAKTIEN 150
|||||||.|:|.|||||||:||||||:||||||||||||||.|:.||:|.
BSU35840___yw 101 LVTFNRKEKTAKMLSIPRDAYVNIPGHGYDKFTHAHAYGGVDLTVKTVEE 150
BSNT_05465___ 151 LLDIPVDYVIESNFDAFKDVVDELNGVSINVKNEKIVNQIKKDTKGKVTL 200
:||||||||:||||.||:|||:|||||.:.||::|::.||||||||||.|
BSU35840___yw 151 MLDIPVDYVVESNFTAFEDVVNELNGVKVTVKSDKVIQQIKKDTKGKVVL 200
BSNT_05465___ 201 KTGVQTLNGEEALAYVRTRKADTDFQRGQRQMEVLNAIIKKSKSLSSIPA 250
:.|..||:||||||||||||||:|..|||||||||:|||.||||||||||
BSU35840___yw 201 QKGTHTLDGEEALAYVRTRKADSDLLRGQRQMEVLSAIIDKSKSLSSIPA 250
BSNT_05465___ 251 YDDIVDSLGENLKMNLSLNDAIGLFPFITSLKSVDTEQLTGSDMYLYSSR 300
||||||::|:||||||||.|||||||||||||||::.||||.|.
BSU35840___yw 251 YDDIVDTMGQNLKMNLSLKDAIGLFPFITSLKSVESIQLTGYDY------ 294
BSNT_05465___ 301 ERKKLYYLKLDSEKLEEVKTELKNDIDN 328
|...:||.||:.:||:|||.||:||:..
BSU35840___yw 295 EPAGVYYFKLNQQKLQEVKKELQNDLGV 322
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