Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05468 and BSU35860
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:23
# Commandline: needle
# -asequence pep-align/BSNT_05468___ywtD.1.22522.seq
# -bsequence pep-align/BSU35860___pgdS.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05468___ywtD-BSU35860___pgdS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05468___ywtD-BSU35860___pgdS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05468___ywtD
# 2: BSU35860___pgdS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 453
# Identity: 408/453 (90.1%)
# Similarity: 412/453 (90.9%)
# Gaps: 40/453 ( 8.8%)
# Score: 2134.0
#
#
#=======================================
BSNT_05468___ 1 MRHSLFICPAYSFCKNIKKSLNIFKKIPMLKLQKEEEIIKVNTLANWKKF 50
:|||||||||
BSU35860___pg 1 ----------------------------------------MNTLANWKKF 10
BSNT_05468___ 51 LLVAVIICFLVPIMTKAEIAEADTSSELIVSEAKNLLGYQYKYGGETPKE 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35860___pg 11 LLVAVIICFLVPIMTKAEIAEADTSSELIVSEAKNLLGYQYKYGGETPKE 60
BSNT_05468___ 101 GFDPSGLIQYVFSKADIHLPRSVNDQYKIGTAVKPENLKPGDILFFKKEG 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35860___pg 61 GFDPSGLIQYVFSKADIHLPRSVNDQYKIGTAVKPENLKPGDILFFKKEG 110
BSNT_05468___ 151 SNGSVPTHDALYIGDGQMVHSTQSKGVIITNYKKSSYWSGTYIGARRIAA 200
|.|:||||||||||||||||||||||||||||||||||||||||||||||
BSU35860___pg 111 STGTVPTHDALYIGDGQMVHSTQSKGVIITNYKKSSYWSGTYIGARRIAA 160
BSNT_05468___ 201 DPATADVPVVQEAEKYIGVPYVFGGSTPSEGFDCSGLVQYVFQQALGIYL 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35860___pg 161 DPATADVPVVQEAEKYIGVPYVFGGSTPSEGFDCSGLVQYVFQQALGIYL 210
BSNT_05468___ 251 PRSAEQQWAVGEKIAPQNIKPGDVVYFSNTYKTGISHAGIYAGAGRFIQA 300
|||||||||||||:||||||||||||||||||||||||||||||||||||
BSU35860___pg 211 PRSAEQQWAVGEKVAPQNIKPGDVVYFSNTYKTGISHAGIYAGAGRFIQA 260
BSNT_05468___ 301 SRSEKVTISYLSEDYWKSKMTGIRRFDNLTIPKENPIVSEATLYVGEVPY 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35860___pg 261 SRSEKVTISYLSEDYWKSKMTGIRRFDNLTIPKENPIVSEATLYVGEVPY 310
BSNT_05468___ 351 KQGGVTPETGFDTAGFVQYVYQKAAGISLPRYATSQYNAGTKIKKADLKP 400
|||||||||||||||||||||||||||||||||||||||||||:||||||
BSU35860___pg 311 KQGGVTPETGFDTAGFVQYVYQKAAGISLPRYATSQYNAGTKIEKADLKP 360
BSNT_05468___ 401 GDIVFFQSTSLNPSIYIGNGQVVHVTLSNGVTITNMNTSTYWKDKYAGSI 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35860___pg 361 GDIVFFQSTSLNPSIYIGNGQVVHVTLSNGVTITNMNTSTYWKDKYAGSI 410
BSNT_05468___ 451 RVQ 453
|||
BSU35860___pg 411 RVQ 413
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