Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05555 and BSU36380
See
DNA alignment /
Visit
BSNT_05555 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:32
# Commandline: needle
# -asequence pep-align/BSNT_05555___rapD.1.22522.seq
# -bsequence pep-align/BSU36380___rapD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05555___rapD-BSU36380___rapD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05555___rapD-BSU36380___rapD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05555___rapD
# 2: BSU36380___rapD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 354
# Identity: 350/354 (98.9%)
# Similarity: 351/354 (99.2%)
# Gaps: 0/354 ( 0.0%)
# Score: 1826.0
#
#
#=======================================
BSNT_05555___ 1 MISKFIEKRMLNMLDEWYSAMSKRKMNHVCTLKEKIDQHLPKIKKNTKLW 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36380___ra 1 MISKFIEKRMLNMLDEWYSAMSKRKMNHVCTLKEKIDQHLPKIKKNTKLW 50
BSNT_05555___ 51 MRYQLFQARHQLLFENQNGLDSLFDDLYGLEDKMDDELKYYLYFFSGLYE 100
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU36380___ra 51 MRYQLFQARHQLLFENQNGLDSLFDGLYGLEDKMDDELKYYLYFFSGLYE 100
BSNT_05555___ 101 MVKTAPKHAVHHFKKAEQYLAAIQNTFEAADLYYQTAGAYYLMKSPPLSI 150
|||||||||||||||||||||||.|||||||||||||||||||||||||:
BSU36380___ra 101 MVKTAPKHAVHHFKKAEQYLAAIHNTFEAADLYYQTAGAYYLMKSPPLSV 150
BSNT_05555___ 151 QYVKKALHIYLHQFGYIKKVITCKLLLAVNYIDQERYEKAEQLFKEIIKK 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36380___ra 151 QYVKKALHIYLHQFGYIKKVITCKLLLAVNYIDQERYEKAEQLFKEIIKK 200
BSNT_05555___ 201 TQQLHDENLLCHAYYNLGFLKATEKKDQEALLYFRKVLKNQEFEMNSPVS 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36380___ra 201 TQQLHDENLLCHAYYNLGFLKATEKKDQEALLYFRKVLKNQEFEMNSPVS 250
BSNT_05555___ 251 YLHCVYESVRALFKTGNITEAKAVLQKGKELSEKVDIQTIYLKLKTLEAL 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36380___ra 251 YLHCVYESVRALFKTGNITEAKAVLQKGKELSEKVDIQTIYLKLKTLEAL 300
BSNT_05555___ 301 YTSVEDPYEQLLEYVLELEKIEAWVDLEVLLEDITEYYKKKDDFEKAAFF 350
|||.||||||||||||||||||||||||||||||||||||||||||||||
BSU36380___ra 301 YTSAEDPYEQLLEYVLELEKIEAWVDLEVLLEDITEYYKKKDDFEKAAFF 350
BSNT_05555___ 351 IMRG 354
||||
BSU36380___ra 351 IMRG 354
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.