Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_05635 and BSU36890

See DNA alignment / Visit BSNT_05635 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:40
# Commandline: needle
#    -asequence pep-align/BSNT_05635___upp.1.22522.seq
#    -bsequence pep-align/BSU36890___upp.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05635___upp-BSU36890___upp.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05635___upp-BSU36890___upp.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05635___upp
# 2: BSU36890___upp
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 209
# Identity:     209/209 (100.0%)
# Similarity:   209/209 (100.0%)
# Gaps:           0/209 ( 0.0%)
# Score: 1067.0
# 
#
#=======================================

BSNT_05635___      1 MGKVYVFDHPLIQHKLTYIRNENTGTKDFRELVDEVATLMAFEITRDLPL     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36890___up      1 MGKVYVFDHPLIQHKLTYIRNENTGTKDFRELVDEVATLMAFEITRDLPL     50

BSNT_05635___     51 EEVDINTPVQAAKSKVISGKKLGVVPILRAGLGMVDGILKLIPAAKVGHV    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36890___up     51 EEVDINTPVQAAKSKVISGKKLGVVPILRAGLGMVDGILKLIPAAKVGHV    100

BSNT_05635___    101 GLYRDPETLKPVEYYVKLPSDVEEREFIVVDPMLATGGSAVEAIHSLKKR    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36890___up    101 GLYRDPETLKPVEYYVKLPSDVEEREFIVVDPMLATGGSAVEAIHSLKKR    150

BSNT_05635___    151 GAKNIRFMCLVAAPEGVEELQKHHSDVDIYIAALDEKLNEKGYIVPGLGD    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36890___up    151 GAKNIRFMCLVAAPEGVEELQKHHSDVDIYIAALDEKLNEKGYIVPGLGD    200

BSNT_05635___    201 AGDRMFGTK    209
                     |||||||||
BSU36890___up    201 AGDRMFGTK    209


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.