Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05929 and BSU38730

See DNA alignment / Visit BSNT_05929 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:15
# Commandline: needle
#    -asequence pep-align/BSNT_05929___cydD.1.22522.seq
#    -bsequence pep-align/BSU38730___cydD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05929___cydD-BSU38730___cydD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05929___cydD-BSU38730___cydD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05929___cydD
# 2: BSU38730___cydD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 575
# Identity:     568/575 (98.8%)
# Similarity:   569/575 (99.0%)
# Gaps:           0/575 ( 0.0%)
# Score: 2851.0
# 
#
#=======================================

BSNT_05929___      1 MKKEEWILPYIKQNARLFVLVIFLGGVTIFSAAFLMFTSGFLISKAATRP     50
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU38730___cy      1 MKKEEWILPYIKQNARLFVLVIFLGAVTIFSAAFLMFTSGFLISKAATRP     50

BSNT_05929___     51 ENILLIYVPIVAVRTFGIARSVSRYVERLVGHHIILKIVSDMRVRLYNML    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38730___cy     51 ENILLIYVPIVAVRTFGIARSVSRYVERLVGHHIILKIVSDMRVRLYNML    100

BSNT_05929___    101 EPGALMLRSRFRTGDMLGILSEDIEHLQDAFLKTIFPAISALFLYAVSVI    150
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU38730___cy    101 EPGALMLRSRFRTGDMLGILSEDIEHLQDAFLKTIFPAISALLLYAVSVI    150

BSNT_05929___    151 ALGFFSWPFAILLALYLFVLVVLFPVVSLLVTRAKNAKLKSGRNVLYSRL    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38730___cy    151 ALGFFSWPFAILLALYLFVLVVLFPVVSLLVTRAKNAKLKSGRNVLYSRL    200

BSNT_05929___    201 TDAVMGVSDWMFSGRRHAFIDAYEKEEHDWFELERKKQRFTRWRDFAAQC    250
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU38730___cy    201 TDAVMGVSDWMFSGRRHAFIDAYEKEERDWFELERKKQRFTRWRDFAAQC    250

BSNT_05929___    251 LVAGLILLMLFWTAGQQADGELAKTMIAAFVLVVFPLTEAFLPLSDALGE    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38730___cy    251 LVAGLILLMLFWTAGQQADGELAKTMIAAFVLVVFPLTEAFLPLSDALGE    300

BSNT_05929___    301 VPGYQDSIRRMNKVAPQLEASQTESGDQMLDLQDVTLAFRDVTFSYDNSS    350
                     ||||||||||||.||||.||||||||||:|||||||||||||||||||||
BSU38730___cy    301 VPGYQDSIRRMNNVAPQPEASQTESGDQILDLQDVTLAFRDVTFSYDNSS    350

BSNT_05929___    351 QVLHNFSFTLRQGEKMALLGRSGSGKSTSLALIEGALKPDSGSVTLNGVE    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38730___cy    351 QVLHNFSFTLRQGEKMALLGRSGSGKSTSLALIEGALKPDSGSVTLNGVE    400

BSNT_05929___    401 TALLKDQIADAVAVLNQKPHLFDTSILNNIRLGNGEASDEDVRRAAKQVK    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38730___cy    401 TALLKDQIADAVAVLNQKPHLFDTSILNNIRLGNGEASDEDVRRAAKQVK    450

BSNT_05929___    451 LHDYIESLPDGYHTSVQETGIRFSGGERQRIALARILLQDTPIIILDEPT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38730___cy    451 LHDYIESLPDGYHTSVQETGIRFSGGERQRIALARILLQDTPIIILDEPT    500

BSNT_05929___    501 VGLDPITERELMETVFEVLKGKTILWITHHLAGVEAADKIVFLENGKTEM    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38730___cy    501 VGLDPITERELMETVFEVLKGKTILWITHHLAGVEAADKIVFLENGKTEM    550

BSNT_05929___    551 EGTHEELLAANERYSRLYHLDVPVK    575
                     ||||||||||||||.||||||||||
BSU38730___cy    551 EGTHEELLAANERYRRLYHLDVPVK    575


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.