Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00904 and BSU39850

See DNA alignment / Visit BSNT_00904 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:20
# Commandline: needle
#    -asequence pep-align/BSNT_00904.1.22522.seq
#    -bsequence pep-align/BSU39850___yxbF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00904-BSU39850___yxbF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00904-BSU39850___yxbF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00904
# 2: BSU39850___yxbF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 399
# Identity:      52/399 (13.0%)
# Similarity:    98/399 (24.6%)
# Gaps:         237/399 (59.4%)
# Score: 198.0
# 
#
#=======================================

BSNT_00904         1 MSKVDRRITKSQEA-IKIALIELMTEKSFDHITIKEISERANVNRGTIYL     49
                            :.:|.|| :|.||:.|:.::...|||:|||:|:|.|:||::||
BSU39850___yx      1 -------MPESAEAQVKEALLALLKDRDIQHITMKEIAEKAKVSRGSLYL     43

BSNT_00904        50 HYLDKFDLLEKIMEEHINNMGD-FCESAAEMDWI-----ESTVH-CMEYL     92
                     :|.|||.::|.::|:....:|. ..::.:.||.:     ..||| .:.::
BSU39850___yx     44 YYEDKFSIIEDVIEDMKEGLGKALFDAFSHMDTLHLNKKRQTVHPTLSFV     93

BSNT_00904        93 ESNYLFFSTMLASEGARYFRSQFLKFNIEEFRKD-------VDVTKGKNY    135
                     ..:..|||.|:.       |..|.:|..:.|::|       |::|.    
BSU39850___yx     94 HEHRSFFSVMMN-------RGHFHRFFKDVFQQDVLLAPIHVNLTP----    132

BSNT_00904       136 GQSEDVIVEFIANAYVGVVEWWLKNEMPYPPRVMAEKVGELLERIL----    181
                      ...|:...:.|.....::.:||..:....|..:::||.||:.:..    
BSU39850___yx    133 -IERDIYGHYRALYTYAIILYWLNEDAAASPEAISQKVWELVSQKRFYWL    181

BSNT_00904       181 --------------------------------------------------    181
                                                                       
BSU39850___yx    182 FGKAVPGEREKEKQIDRRVVRTREALQKAFLDVLAEKQDYAGITISDITR    231

BSNT_00904       181 --------------------------------------------------    181
                                                                       
BSU39850___yx    232 KSNIRRATFYDHYANKEELLQTMIQRSCAEIIDHLTIASSPNEFSLKEAE    281

BSNT_00904       181 --------------------------------------------------    181
                                                                       
BSU39850___yx    282 KALAILLSALSNMPIVHFLNREWGVPHVIPDMFKALESFYLHQQTDIHAE    331

BSNT_00904       181 -------------------------------------------------    181
                                                                      
BSU39850___yx    332 KKLYAHYVSAMIIGLLLYRLDEGKAHPPEVLAREFLQFLDVKKYKVVLL    380


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