Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_06224 and BSU40520

See DNA alignment / Visit BSNT_06224 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:52
# Commandline: needle
#    -asequence pep-align/BSNT_06224___yybS.1.22522.seq
#    -bsequence pep-align/BSU40520___yybS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06224___yybS-BSU40520___yybS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06224___yybS-BSU40520___yybS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06224___yybS
# 2: BSU40520___yybS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity:     308/309 (99.7%)
# Similarity:   309/309 (100.0%)
# Gaps:           0/309 ( 0.0%)
# Score: 1538.0
# 
#
#=======================================

BSNT_06224___      1 MKQTRALMEGAILISLFAIITLLVVYVPVIGTILLFALPLPMILYTIRHG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40520___yy      1 MKQTRALMEGAILISLFAIITLLVVYVPVIGTILLFALPLPMILYTIRHG     50

BSNT_06224___     51 LKLGIWMGAVSLPVVFIVGSFNGLIVAFMSACAGIAMGHFFKRKEPGHAI    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40520___yy     51 LKLGIWMGAVSLPVVFIVGSFNGLIVAFMSACAGIAMGHFFKRKEPGHAI    100

BSNT_06224___    101 ISGALIYMLSIVFYFVISIQFLGINIIDEAMTQYRQSLDMVETVAKQSGN    150
                     |||||||||||||||||||||||||||||||||||||||:||||||||||
BSU40520___yy    101 ISGALIYMLSIVFYFVISIQFLGINIIDEAMTQYRQSLDIVETVAKQSGN    150

BSNT_06224___    151 AGQFEKQLKLMEEQLGIVQYLFPTAIVMVGVIFSFLSYLIAKPLLRRFSP    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40520___yy    151 AGQFEKQLKLMEEQLGIVQYLFPTAIVMVGVIFSFLSYLIAKPLLRRFSP    200

BSNT_06224___    201 DIPNLKPFRELKFPQSVVVLYLIIVMLSFLPLEKGQMLYSIALNGEFILG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40520___yy    201 DIPNLKPFRELKFPQSVVVLYLIIVMLSFLPLEKGQMLYSIALNGEFILG    250

BSNT_06224___    251 FLIFIQGLSFIFFYCHKKQYPKAAAVIAVILGFVHPVFMAAIRILGVLDM    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40520___yy    251 FLIFIQGLSFIFFYCHKKQYPKAAAVIAVILGFVHPVFMAAIRILGVLDM    300

BSNT_06224___    301 GFHIRNKVK    309
                     |||||||||
BSU40520___yy    301 GFHIRNKVK    309


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.