Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00036 and RBAM_000230

See DNA alignment / Visit BSNT_00036 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:48
# Commandline: needle
#    -asequence pep-align/BSNT_00036___yaaJ.1.9828.seq
#    -bsequence pep-align/RBAM_000230___yaaJ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00036___yaaJ-RBAM_000230___yaaJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00036___yaaJ-RBAM_000230___yaaJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00036___yaaJ
# 2: RBAM_000230___yaaJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 161
# Identity:     136/161 (84.5%)
# Similarity:   147/161 (91.3%)
# Gaps:           1/161 ( 0.6%)
# Score: 704.0
# 
#
#=======================================

BSNT_00036___      1 MTQDELYMKEAIKEAKKAEEKGEVPIGAVLVVNDEIIARAHNLRETEQRS     50
                      ..||.||:||||||||||.|||||||||||::|||:|||||||||||||
RBAM_000230__      1 -MNDEYYMREAIKEAKKAEAKGEVPIGAVLVLHDEIVARAHNLRETEQRS     49

BSNT_00036___     51 IAHAEMLVIDEACKALGTWRLEGATLYVTLEPCPMCAGAVVLSRVEKVVF    100
                     :||||||.|||||:.|||||||.|.||||||||||||||||||||:||||
RBAM_000230__     50 LAHAEMLAIDEACRKLGTWRLEDAVLYVTLEPCPMCAGAVVLSRVDKVVF     99

BSNT_00036___    101 GAFDPKGGCSGTLMNLLQEERFNHQAEVVSGVLEEECGGMLSAFFRELRK    150
                     |||||||||:|||||||||||||||||||||||.||||.|||||||:||:
RBAM_000230__    100 GAFDPKGGCTGTLMNLLQEERFNHQAEVVSGVLGEECGEMLSAFFRKLRR    149

BSNT_00036___    151 KKKAARKNLSE    161
                     :||..||.|||
RBAM_000230__    150 QKKDMRKKLSE    160


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