Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00070 and RBAM_000450

See DNA alignment / Visit BSNT_00070 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:50
# Commandline: needle
#    -asequence pep-align/BSNT_00070___yabC.1.9828.seq
#    -bsequence pep-align/RBAM_000450___yabC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00070___yabC-RBAM_000450___yabC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00070___yabC-RBAM_000450___yabC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00070___yabC
# 2: RBAM_000450___yabC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 293
# Identity:     246/293 (84.0%)
# Similarity:   271/293 (92.5%)
# Gaps:           1/293 ( 0.3%)
# Score: 1306.0
# 
#
#=======================================

BSNT_00070___      1 MLRRQMSFNGKSDMGILYLVPTPIGNLEDMTFRAIDTLKSVDAIAAEDTR     50
                     ||||||||||||:||.||||||||||||||||||::||||.|.|||||||
RBAM_000450__      1 MLRRQMSFNGKSEMGTLYLVPTPIGNLEDMTFRAVETLKSADVIAAEDTR     50

BSNT_00070___     51 QTKKLCHVYEIETPLVSYHEHNKESSGHKIIEWLKSGKNIALVSDAGLPT    100
                     |||||||||:|||.|:|||||||||||||||||||||||:|||||||:||
RBAM_000450__     51 QTKKLCHVYDIETSLISYHEHNKESSGHKIIEWLKSGKNVALVSDAGMPT    100

BSNT_00070___    101 ISDPGAEIVKDFTDIGGYVVPLPGANAALTALIASGIVPQPFFFYGFLNR    150
                     |||||||||:|||.||||||||||||||||||.||||.||||||||||||
RBAM_000450__    101 ISDPGAEIVRDFTQIGGYVVPLPGANAALTALTASGITPQPFFFYGFLNR    150

BSNT_00070___    151 QKKEKKKELEALKKRQETIIFYEAPHRLKETLSAMAEILGDREIAVTREL    200
                     ||||||||||.|||||||:|||||||||||||:||.::||:|.|||||||
RBAM_000450__    151 QKKEKKKELEILKKRQETMIFYEAPHRLKETLTAMHDVLGNRTIAVTREL    200

BSNT_00070___    201 TKKYEEFIRGTISEVIGWANEDQIRGEFCLVVEGSNNEEVDEEEQ-WWET    249
                     ||||||||||||:||:.|||||||||||||||||:...|.||||: ||..
RBAM_000450__    201 TKKYEEFIRGTIAEVMEWANEDQIRGEFCLVVEGNQTAEPDEEEKPWWTE    250

BSNT_00070___    250 LTAKEHVEHYISKGATSKEAIKKAAVDRNVPKREVYDAYHIKQ    292
                     |:.||||||||::||:||:|||:.||||.|||||:||||||:.
RBAM_000450__    251 LSEKEHVEHYINEGASSKQAIKQTAVDRGVPKREIYDAYHIQS    293


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