Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00076 and RBAM_000500

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:51
# Commandline: needle
#    -asequence pep-align/BSNT_00076___rnmV.1.9828.seq
#    -bsequence pep-align/RBAM_000500___rnmV.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00076___rnmV-RBAM_000500___rnmV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00076___rnmV-RBAM_000500___rnmV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00076___rnmV
# 2: RBAM_000500___rnmV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 187
# Identity:     166/187 (88.8%)
# Similarity:   177/187 (94.7%)
# Gaps:           1/187 ( 0.5%)
# Score: 842.0
# 
#
#=======================================

BSNT_00076___      1 MKIKEIIVVEGRDDTARIKLAVDADTIETNGSAIDDHVIDQIRLAQKTRG     50
                     ||||||||||||||||||||||||||||||||||.|.||.||||||:|||
RBAM_000500__      1 MKIKEIIVVEGRDDTARIKLAVDADTIETNGSAIGDEVIRQIRLAQETRG     50

BSNT_00076___     51 VIILTDPDFPGEKIRKTISEAVPGCKHAFLPKHLAKPKNKRGIGVEHASV    100
                     ||:||||||||||||||||||||||||||||||||||||||||||||||:
RBAM_000500__     51 VIVLTDPDFPGEKIRKTISEAVPGCKHAFLPKHLAKPKNKRGIGVEHASI    100

BSNT_00076___    101 ESIRACLENVHEEMEAQPSDISAEDLIHAGLIGGHAAKCRRERLGDLLKI    150
                     ||||||||||||||||:||:|||||:|.||||||.|||.|||||||||||
RBAM_000500__    101 ESIRACLENVHEEMEAKPSEISAEDVIQAGLIGGPAAKRRRERLGDLLKI    150

BSNT_00076___    151 GYTNGKQLQKRLQMFQIKKSDFMSALDTVMREEQNE-    186
                     ||||||||||||||||||:|||:.|||.:.:|||:| 
RBAM_000500__    151 GYTNGKQLQKRLQMFQIKRSDFIDALDAMRQEEQDEQ    187


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