Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00078 and RBAM_000510

See DNA alignment / Visit BSNT_00078 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:51
# Commandline: needle
#    -asequence pep-align/BSNT_00078___ksgA.1.9828.seq
#    -bsequence pep-align/RBAM_000510___ksgA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00078___ksgA-RBAM_000510___ksgA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00078___ksgA-RBAM_000510___ksgA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00078___ksgA
# 2: RBAM_000510___ksgA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 293
# Identity:     270/293 (92.2%)
# Similarity:   283/293 (96.6%)
# Gaps:           1/293 ( 0.3%)
# Score: 1361.0
# 
#
#=======================================

BSNT_00078___      1 -MNKDIATPIRTKEILKKYGFSFKKSLGQNFLIDTNILNRIVDHAEVTEK     49
                      .||||||||||||||||||||||||||||||||||||:|||||||:|::
RBAM_000510__      1 MNNKDIATPIRTKEILKKYGFSFKKSLGQNFLIDTNILDRIVDHAEITDR     50

BSNT_00078___     50 TGVIEIGPGIGALTEQLAKRAKKVVAFEIDQRLLPILKDTLSPYENVTVI     99
                     |||||||||||||||||||||||||||||||||||||.||||||:|||:|
RBAM_000510__     51 TGVIEIGPGIGALTEQLAKRAKKVVAFEIDQRLLPILNDTLSPYDNVTII    100

BSNT_00078___    100 HQDVLKADVKSVIEEQFQDCDEIMVVANLPYYVTTPIIMKLLEEHLPLKG    149
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
RBAM_000510__    101 HQDVLKADVKSVIEEQFQDCDEIMVTANLPYYVTTPIIMKLLEEHLPLKG    150

BSNT_00078___    150 IVVMLQKEVAERMAADPSSKEYGSLSIAVQFYTEAKTVMIVPKTVFVPQP    199
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
RBAM_000510__    151 IVVMLQKEVAERMAADPSSKEYGSLSIAVQFYTEAKTVMTVPKTVFVPQP    200

BSNT_00078___    200 NVDSAVIRLILRDGPAVDVENESFFFQLIKASFAQRRKTLLNNLVNNLPE    249
                     |||||||||:|||||||||:||.||||||||||||||||||||||||||.
RBAM_000510__    201 NVDSAVIRLLLRDGPAVDVDNEPFFFQLIKASFAQRRKTLLNNLVNNLPG    250

BSNT_00078___    250 GKAQKSTIEQVLEETNIDGKRRGESLSIEEFAALSNGLYKALF    292
                     ||.:|:.||:||:|||||||||||||||||||.|||||:||||
RBAM_000510__    251 GKEKKAQIEEVLQETNIDGKRRGESLSIEEFALLSNGLHKALF    293


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