Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00101 and RBAM_000700

See DNA alignment / Visit BSNT_00101 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:53
# Commandline: needle
#    -asequence pep-align/BSNT_00101___yabQ.1.9828.seq
#    -bsequence pep-align/RBAM_000700___yabQ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00101___yabQ-RBAM_000700___yabQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00101___yabQ-RBAM_000700___yabQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00101___yabQ
# 2: RBAM_000700___yabQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 211
# Identity:     150/211 (71.1%)
# Similarity:   174/211 (82.5%)
# Gaps:           0/211 ( 0.0%)
# Score: 766.0
# 
#
#=======================================

BSNT_00101___      1 MTLTTQFYTMLAMSGMGLWLGASLDTYRLFVIRAKTARWLLFIHDILFWI     50
                     |||||||||||||:|||.|||||||||||||.||||||||||||||||||
RBAM_000700__      1 MTLTTQFYTMLAMTGMGAWLGASLDTYRLFVSRAKTARWLLFIHDILFWI     50

BSNT_00101___     51 VQGLLFFYVLLHVNEGEFRIYIFLAVLLGVATYQSLCKRIYIKILKFVIY    100
                     |||||||||||:|||||.|:|||||||||:||||||.||:|||||||.|:
RBAM_000700__     51 VQGLLFFYVLLNVNEGELRVYIFLAVLLGIATYQSLFKRMYIKILKFAIH    100

BSNT_00101___    101 LVVSVYQFFKKLIQHVLFRPIVWTCGAIIWLAAFLFKKTYSLIGFLLLCL    150
                     |.||:|||.|||||||||||::.....:|.|...:...:|.:..|...||
RBAM_000700__    101 LAVSLYQFAKKLIQHVLFRPVLLLFKLLIGLITVVSLYSYRVSAFFAKCL    150

BSNT_00101___    151 YKIVMVLCFPIRFIAKQCLKLLPVKMRLTFRRYFEKGAGFLKKKKKLLIT    200
                     :|||..|.:|:.|:.||.|||||.|.||||:|||:|.||||:|.|||:||
RBAM_000700__    151 FKIVTFLLYPLFFLLKQLLKLLPEKWRLTFKRYFQKSAGFLQKSKKLIIT    200

BSNT_00101___    201 IRTTITRFLKK    211
                     ||:|:.|.||:
RBAM_000700__    201 IRSTMIRILKR    211


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