Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00121 and RBAM_000800

See DNA alignment / Visit BSNT_00121 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:54
# Commandline: needle
#    -asequence pep-align/BSNT_00121___ftsH.1.9828.seq
#    -bsequence pep-align/RBAM_000800___ftsH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00121___ftsH-RBAM_000800___ftsH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00121___ftsH-RBAM_000800___ftsH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00121___ftsH
# 2: RBAM_000800___ftsH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 639
# Identity:     615/639 (96.2%)
# Similarity:   627/639 (98.1%)
# Gaps:           2/639 ( 0.3%)
# Score: 3112.0
# 
#
#=======================================

BSNT_00121___      1 MNRVFRNTIFYLLILLVVIGVVSYFQTSNPKTENMSYSTFIKNLDDGKVD     50
                     |||||||||||||||||||||||||||||||||||||||||||||:||||
RBAM_000800__      1 MNRVFRNTIFYLLILLVVIGVVSYFQTSNPKTENMSYSTFIKNLDEGKVD     50

BSNT_00121___     51 SVSVQPVRGVYEVKGQLKNYDKDQYFLTHVPEGKGADQIFNALKKTDVKV    100
                     ||||||||||||||||||.|||||||||||||||||||||:|:|||||||
RBAM_000800__     51 SVSVQPVRGVYEVKGQLKKYDKDQYFLTHVPEGKGADQIFDAIKKTDVKV    100

BSNT_00121___    101 EPAQETSGWVTFLTTIIPFVIIFILFFFLLNQAQGGGSRVMNFGKSKAKL    150
                     :|||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_000800__    101 DPAQETSGWVTFLTTIIPFVIIFILFFFLLNQAQGGGSRVMNFGKSKAKL    150

BSNT_00121___    151 YTEEKKRVKFKDVAGADEEKQELVEVVEFLKDPRKFAELGARIPKGVLLV    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_000800__    151 YTEEKKRVKFKDVAGADEEKQELVEVVEFLKDPRKFAELGARIPKGVLLV    200

BSNT_00121___    201 GPPGTGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAK    250
                     |||||||||||:|.||||||||||||||||||||||||||||||||||||
RBAM_000800__    201 GPPGTGKTLLARASAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAK    250

BSNT_00121___    251 KNAPCLIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGI    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_000800__    251 KNAPCLIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGI    300

BSNT_00121___    301 IIIAATNRADILDPALLRPGRFDRQITVDRPDVIGREAVLKVHARNKPLD    350
                     ||||||||||||||||||||||||||||||||||||||||:|||||||||
RBAM_000800__    301 IIIAATNRADILDPALLRPGRFDRQITVDRPDVIGREAVLQVHARNKPLD    350

BSNT_00121___    351 ETVNLKSIAMRTPGFSGADLENLLNEAALVAARQNKKKIDARDIDEATDR    400
                     ||||||:||.||||||||||||||||||||||||||||||.|||||||||
RBAM_000800__    351 ETVNLKAIASRTPGFSGADLENLLNEAALVAARQNKKKIDMRDIDEATDR    400

BSNT_00121___    401 VIAGPAKKSRVISKKERNIVAYHEGGHTVIGLVLDEADMVHKVTIVPRGQ    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_000800__    401 VIAGPAKKSRVISKKERNIVAYHEGGHTVIGLVLDEADMVHKVTIVPRGQ    450

BSNT_00121___    451 AGGYAVMLPREDRYFQTKPELLDKIVGLLGGRVAEEIIFGEVSTGAHNDF    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_000800__    451 AGGYAVMLPREDRYFQTKPELLDKIVGLLGGRVAEEIIFGEVSTGAHNDF    500

BSNT_00121___    501 QRATNIARRMVTEFGMSEKLGPLQFGQSQGGQVFLGRDFNNEQNYSDQIA    550
                     ||||:|||||||||||||||||||||||||||||||||||||||||||||
RBAM_000800__    501 QRATSIARRMVTEFGMSEKLGPLQFGQSQGGQVFLGRDFNNEQNYSDQIA    550

BSNT_00121___    551 YEIDQEIQRIIKECYERAKQILTENRDKLELIAQTLLKVETLDAEQIKHL    600
                     |||||||||||||||||||.|||||||||||||||||.||||||||||||
RBAM_000800__    551 YEIDQEIQRIIKECYERAKTILTENRDKLELIAQTLLDVETLDAEQIKHL    600

BSNT_00121___    601 IDHGTLPERNFSDDE-KNDDVKVNILTKTE-EKKDDTKE    637
                     :|||.|||||||||. :.||||||||:||| ||||:.||
RBAM_000800__    601 VDHGKLPERNFSDDHLQKDDVKVNILSKTEDEKKDEPKE    639


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