Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00130 and RBAM_000860

See DNA alignment / Visit BSNT_00130 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:55
# Commandline: needle
#    -asequence pep-align/BSNT_00130___pabA.1.9828.seq
#    -bsequence pep-align/RBAM_000860___pabA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00130___pabA-RBAM_000860___pabA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00130___pabA-RBAM_000860___pabA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00130___pabA
# 2: RBAM_000860___pabA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 195
# Identity:     171/195 (87.7%)
# Similarity:   187/195 (95.9%)
# Gaps:           1/195 ( 0.5%)
# Score: 917.0
# 
#
#=======================================

BSNT_00130___      1 MILMIDNYDSFTYNLVQYLGELGEELVVKRNDSITIEEIEELSPDFLMIS     50
                     ||||||||||||||||||||||||||:|:|||.||||:||||:|||||||
RBAM_000860__      1 MILMIDNYDSFTYNLVQYLGELGEELIVRRNDEITIEQIEELAPDFLMIS     50

BSNT_00130___     51 PGPCSPDEAGISLEAIKHFAGEIPIFGVCLGHQSIAQVFGGDVVRAERLM    100
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
RBAM_000860__     51 PGPCSPDEAGISLEAIKHFAGSIPIFGVCLGHQSIAQVFGGDVVRAERLM    100

BSNT_00130___    101 HGKTSDIEHDGKTIFEGLKNPLVATRYHSLIVKPETLPSCFTVTAQTKEG    150
                     |||||::.|||:|||:||:||||||||||||||.:|||.||||:||||||
RBAM_000860__    101 HGKTSEVMHDGQTIFKGLQNPLVATRYHSLIVKADTLPDCFTVSAQTKEG    150

BSNT_00130___    151 EIMAIRHNDLPIEGVQFHPESIMTSFGKEMLRNFIETYRKEVIA-    194
                     ||||||||:||:|||||||||||||||||||||||||:||:.:. 
RBAM_000860__    151 EIMAIRHNELPVEGVQFHPESIMTSFGKEMLRNFIETHRKKEVTV    195


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