Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00183 and RBAM_001140

See DNA alignment / Visit BSNT_00183 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:57
# Commandline: needle
#    -asequence pep-align/BSNT_00183___yacL.1.9828.seq
#    -bsequence pep-align/RBAM_001140___yacL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00183___yacL-RBAM_001140___yacL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00183___yacL-RBAM_001140___yacL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00183___yacL
# 2: RBAM_001140___yacL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 366
# Identity:     356/366 (97.3%)
# Similarity:   360/366 (98.4%)
# Gaps:           0/366 ( 0.0%)
# Score: 1779.0
# 
#
#=======================================

BSNT_00183___      1 MLKRIVQAFFIIFGGVVGIFLIPELFVLLNIQDIPLITNAYTSAAIGAII     50
                     ||||||||||||.|||||||||||||||.|||||||||||||||||||||
RBAM_001140__      1 MLKRIVQAFFIIVGGVVGIFLIPELFVLSNIQDIPLITNAYTSAAIGAII     50

BSNT_00183___     51 FFLISIWGTEYVVNWVKWIEDSLLKAPVPDLLFGSLGLVFGLIIAYLIVN    100
                     |||||||.||||:|||||||||||:|||||||||||||||||||||||||
RBAM_001140__     51 FFLISIWTTEYVINWVKWIEDSLLRAPVPDLLFGSLGLVFGLIIAYLIVN    100

BSNT_00183___    101 VIPLDNIPYRIFSTIIPVFLAFFLGYLGFQVGFKKKDELISLFSISARMQ    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001140__    101 VIPLDNIPYRIFSTIIPVFLAFFLGYLGFQVGFKKKDELISLFSISARMQ    150

BSNT_00183___    151 KKKGTADEEHEVQDKKLKILDTSVIIDGRIADICQTGFLEGVIVIPQFVL    200
                     ||||:||||.|.|||:||||||||||||||||||||||||||||||||||
RBAM_001140__    151 KKKGSADEEQEEQDKRLKILDTSVIIDGRIADICQTGFLEGVIVIPQFVL    200

BSNT_00183___    201 EELQHIADSSDVLKRNRGRRGLDILNRIQKELDIEVEIYEGDFEDIQEVD    250
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
RBAM_001140__    201 EELQHIADSSDVLKRNRGRRGLDILNRIQKELDITVEIYEGDFEDIQEVD    250

BSNT_00183___    251 SKLVKLAKLTSGVVVTNDFNLNKVCELQKVAVLNINDLANAVKPVVLPGE    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001140__    251 SKLVKLAKLTSGVVVTNDFNLNKVCELQKVAVLNINDLANAVKPVVLPGE    300

BSNT_00183___    301 EMNVQVIKDGKEHNQGVAYLDDGTMIVVEEGRNYIGKHIDVLVTSVLQTA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001140__    301 EMNVQVIKDGKEHNQGVAYLDDGTMIVVEEGRNYIGKHIDVLVTSVLQTA    350

BSNT_00183___    351 AGRMIFAKPKLLEKAL    366
                     ||||||||||||||||
RBAM_001140__    351 AGRMIFAKPKLLEKAL    366


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