Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00211 and RBAM_001340

See DNA alignment / Visit BSNT_00211 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:00
# Commandline: needle
#    -asequence pep-align/BSNT_00211___ybxF.1.9828.seq
#    -bsequence pep-align/RBAM_001340___ybxF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00211___ybxF-RBAM_001340___ybxF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00211___ybxF-RBAM_001340___ybxF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00211___ybxF
# 2: RBAM_001340___ybxF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 82
# Identity:      68/82 (82.9%)
# Similarity:    76/82 (92.7%)
# Gaps:           0/82 ( 0.0%)
# Score: 328.0
# 
#
#=======================================

BSNT_00211___      1 MSYDKVSQAKSIIIGTKQTVKALKRGSVKEVVVAKDADPILTSSVVSLAE     50
                     ||||||||||||||||||||||||||||||||||||||.:||:.|:.||:
RBAM_001340__      1 MSYDKVSQAKSIIIGTKQTVKALKRGSVKEVVVAKDADSVLTAGVIQLAK     50

BSNT_00211___     51 DQGISVSMVESMKKLGKACGIEVGAAAVAIIL     82
                     :|..:|.||:||||||||||||||||||||:|
RBAM_001340__     51 NQNTAVCMVDSMKKLGKACGIEVGAAAVAIML     82


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