Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00217 and RBAM_001390
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:01
# Commandline: needle
# -asequence pep-align/BSNT_00217___ybaC.1.9828.seq
# -bsequence pep-align/RBAM_001390___ybaC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00217___ybaC-RBAM_001390___ybaC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00217___ybaC-RBAM_001390___ybaC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00217___ybaC
# 2: RBAM_001390___ybaC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 321
# Identity: 165/321 (51.4%)
# Similarity: 216/321 (67.3%)
# Gaps: 3/321 ( 0.9%)
# Score: 848.0
#
#
#=======================================
BSNT_00217___ 1 ---MIPEKKSIAIMKELSIGNTKQMLMINGVDVKNPLLLFLHGGPGTPQI 47
...:...|:::::|.|..::|.:||||.|..||||||||||||||||
RBAM_001390__ 1 MNDNFKKTNRISMLQQLLINGSEQTIMINGDDRSNPLLLFLHGGPGTPQI 50
BSNT_00217___ 48 GYVRHYQKELEQYFTVVHWDQRGSGLSYSKRISHHSMTIDHFIKDTIQVT 97
||.|.||.:||::||||:|||||:||||||.|...|||:|....|||.:|
RBAM_001390__ 51 GYARKYQNKLEKHFTVVNWDQRGAGLSYSKEIPGSSMTLDQLTADTIHLT 100
BSNT_00217___ 98 QWLLAHFSKSKLYLAGHSWGSILALHVLQQCPDLFYAYYGISQVVNPHDE 147
:.|...||:.|:|:||:||||:|||||||:.|||:|||.|||||||...|
RBAM_001390__ 101 ERLCKQFSRQKIYIAGYSWGSVLALHVLQERPDLYYAYIGISQVVNIQKE 150
BSNT_00217___ 148 ESTAFQNIREISKSKKASLLSFLTRFIGAPPWKQDIQHLIYRFCVELSRG 197
|:.|::.:.|.|:.:|..||.....|||||||::.:|..::..|:|:..|
RBAM_001390__ 151 ETEAYRLMLEWSRQRKHFLLEKTLSFIGAPPWEKQLQRSLFLLCIEMRGG 200
BSNT_00217___ 198 GFTRRHRQSLAVLFQMLTGNEYGVRNMHSFLNGLRFSKKHLTGELYRFNA 247
|||.....:|....:||.|..||||.......|..||.|||..:|..|:|
RBAM_001390__ 201 GFTHHPIGALKAGGRMLFGEPYGVRGSFLAARGQMFSLKHLWEDLIFFDA 250
BSNT_00217___ 248 FTSVPSIKVPCVFISGKHDLIVPAEISKQYYQVLEAPEKRWFQFENSAHT 297
..||.||.:||.|:||::||.||...|.:|||.::||.|.|..||||||:
RBAM_001390__ 251 GESVSSIIIPCCFMSGRYDLTVPGTTSFEYYQKVDAPYKEWHWFENSAHS 300
BSNT_00217___ 298 PHIEEPALFANTLSRHARHHL 318
||:|||..||..:||.|..||
RBAM_001390__ 301 PHLEEPDRFAEVVSRFASFHL 321
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