Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00226 and RBAM_001470

See DNA alignment / Visit BSNT_00226 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:02
# Commandline: needle
#    -asequence pep-align/BSNT_00226___rpsC.1.9828.seq
#    -bsequence pep-align/RBAM_001470___rpsC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00226___rpsC-RBAM_001470___rpsC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00226___rpsC-RBAM_001470___rpsC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00226___rpsC
# 2: RBAM_001470___rpsC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 218
# Identity:     215/218 (98.6%)
# Similarity:   217/218 (99.5%)
# Gaps:           0/218 ( 0.0%)
# Score: 1093.0
# 
#
#=======================================

BSNT_00226___      1 MGQKVNPVGLRIGVIRDWESKWYAGKDYADFLHEDLKIREYISKRLSDAS     50
                     ||||||||||||||||||||||||||||||||||||||||:|||||||||
RBAM_001470__      1 MGQKVNPVGLRIGVIRDWESKWYAGKDYADFLHEDLKIREFISKRLSDAS     50

BSNT_00226___     51 VSKVEIERAANRVNITIHTAKPGMVIGKGGSEVEALRKALNSLTGKRVHI    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001470__     51 VSKVEIERAANRVNITIHTAKPGMVIGKGGSEVEALRKALNSLTGKRVHI    100

BSNT_00226___    101 NILEIKRADLDAQLVADNIARQLENRVSFRRAQKQQIQRTMRAGAQGVKT    150
                     ||||||||||||||||||||||||||:|||||||||||||||||||||||
RBAM_001470__    101 NILEIKRADLDAQLVADNIARQLENRISFRRAQKQQIQRTMRAGAQGVKT    150

BSNT_00226___    151 MVSGRLGGADIARSEYYSEGTVPLHTLRADIDYATSEADTTYGKLGVKVW    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001470__    151 MVSGRLGGADIARSEYYSEGTVPLHTLRADIDYATSEADTTYGKLGVKVW    200

BSNT_00226___    201 IYRGEVLPTKKKKEEGGK    218
                     ||||||||||||.|||||
RBAM_001470__    201 IYRGEVLPTKKKTEEGGK    218


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