Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00229 and RBAM_001500

See DNA alignment / Visit BSNT_00229 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:02
# Commandline: needle
#    -asequence pep-align/BSNT_00229___rpsQ.1.9828.seq
#    -bsequence pep-align/RBAM_001500___rpsQ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00229___rpsQ-RBAM_001500___rpsQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00229___rpsQ-RBAM_001500___rpsQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00229___rpsQ
# 2: RBAM_001500___rpsQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 87
# Identity:      84/87 (96.6%)
# Similarity:    85/87 (97.7%)
# Gaps:           0/87 ( 0.0%)
# Score: 417.0
# 
#
#=======================================

BSNT_00229___      1 MSERNQRKVYQGRVVSDKMDKTITVVVETYKKHTLYGKRVKYSKKFKAHD     50
                     ||||||||||||||||||||||||||||||||..:|||||||||||||||
RBAM_001500__      1 MSERNQRKVYQGRVVSDKMDKTITVVVETYKKDPIYGKRVKYSKKFKAHD     50

BSNT_00229___     51 ENNQAKIGDIVKIMETRPLSATKRFRLVEVVEEAVII     87
                     |||||||||||||||||||||||||||||||||||||
RBAM_001500__     51 ENNQAKIGDIVKIMETRPLSATKRFRLVEVVEEAVII     87


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