Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00235 and RBAM_001560

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:02
# Commandline: needle
#    -asequence pep-align/BSNT_00235___rplF.1.9828.seq
#    -bsequence pep-align/RBAM_001560___rplF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00235___rplF-RBAM_001560___rplF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00235___rplF-RBAM_001560___rplF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00235___rplF
# 2: RBAM_001560___rplF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 179
# Identity:     172/179 (96.1%)
# Similarity:   175/179 (97.8%)
# Gaps:           0/179 ( 0.0%)
# Score: 874.0
# 
#
#=======================================

BSNT_00235___      1 MSRVGKKLLEIPSDVTVTLNDNNTVAVKGPKGELTRTFHPDMEIKVEDNV     50
                     |||||||||||||.||||||:.|||||||||||||||||||||||:||||
RBAM_001560__      1 MSRVGKKLLEIPSGVTVTLNEGNTVAVKGPKGELTRTFHPDMEIKIEDNV     50

BSNT_00235___     51 LTVARPSDQKEHRALHGTTRSLLGNMVEGVSKGFERGLELVGVGYRASKS    100
                     |||.||||.||||||||||||||||||||||||||||||||||||||:||
RBAM_001560__     51 LTVTRPSDHKEHRALHGTTRSLLGNMVEGVSKGFERGLELVGVGYRAAKS    100

BSNT_00235___    101 GNKLVLNVGYSHPVEIVPEEGIEIEVPSQTKVVVKGTDKERVGAIAANIR    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001560__    101 GNKLVLNVGYSHPVEIVPEEGIEIEVPSQTKVVVKGTDKERVGAIAANIR    150

BSNT_00235___    151 AVRSPEPYKGKGIRYEGEVVRRKEGKSAK    179
                     |||||||||||||||||||||||||||||
RBAM_001560__    151 AVRSPEPYKGKGIRYEGEVVRRKEGKSAK    179


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