Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00240 and RBAM_001610

See DNA alignment / Visit BSNT_00240 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:03
# Commandline: needle
#    -asequence pep-align/BSNT_00240___secY.1.9828.seq
#    -bsequence pep-align/RBAM_001610___secY.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00240___secY-RBAM_001610___secY.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00240___secY-RBAM_001610___secY.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00240___secY
# 2: RBAM_001610___secY
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 431
# Identity:     416/431 (96.5%)
# Similarity:   425/431 (98.6%)
# Gaps:           0/431 ( 0.0%)
# Score: 2100.0
# 
#
#=======================================

BSNT_00240___      1 MFKTISNFMRVSDIRNKIIFTLLMLIVFRIGAFIPVPYVNAEALQAQSQM     50
                     |||||||||||||||||||||||||||||||||||||||||:|||.||.|
RBAM_001610__      1 MFKTISNFMRVSDIRNKIIFTLLMLIVFRIGAFIPVPYVNAQALQTQSSM     50

BSNT_00240___     51 GVFDLLNTFGGGALYQFSIFAMGITPYITASIIIQLLQMDVVPKFTEWSK    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001610__     51 GVFDLLNTFGGGALYQFSIFAMGITPYITASIIIQLLQMDVVPKFTEWSK    100

BSNT_00240___    101 QGEVGRRKLAQFTRYFTIVLGFIQALGMSYGFNNLANGMLIEKSGVSTYL    150
                     |||||||||||||||||||||||||||||||||||||||||||||:||||
RBAM_001610__    101 QGEVGRRKLAQFTRYFTIVLGFIQALGMSYGFNNLANGMLIEKSGISTYL    150

BSNT_00240___    151 IIALVLTGGTAFLMWLGEQITSHGVGNGISIIIFAGIVSSIPKTIGQIYE    200
                     ||||||||||||||||||||||:|||||||||||||||:|||||:|||||
RBAM_001610__    151 IIALVLTGGTAFLMWLGEQITSNGVGNGISIIIFAGIVASIPKTVGQIYE    200

BSNT_00240___    201 TQFVGSNDQLFIHIVKVALLVIAILAVIVGVIFIQQAVRKIAIQYAKGTG    250
                     ||||||:|||||||||:|||||||||||||||||||||||||||||||.|
RBAM_001610__    201 TQFVGSSDQLFIHIVKIALLVIAILAVIVGVIFIQQAVRKIAIQYAKGQG    250

BSNT_00240___    251 RSPAGGGQSTHLPLKVNPAGVIPVIFAVAFLITPRTIASFFGTNDVTKWI    300
                     |||.||||||||||||||||||||||||||||||||||||||.|:|||||
RBAM_001610__    251 RSPVGGGQSTHLPLKVNPAGVIPVIFAVAFLITPRTIASFFGENNVTKWI    300

BSNT_00240___    301 QNNFDNTHPVGMAIYVALIIAFTYFYAFVQVNPEQMADNLKKQGGYIPGV    350
                     |.|||||||||||:||||||||||||||||||||||||||||||||||||
RBAM_001610__    301 QANFDNTHPVGMAVYVALIIAFTYFYAFVQVNPEQMADNLKKQGGYIPGV    350

BSNT_00240___    351 RPGKMTQDRITSILYRLTFVGSIFLAVISILPIFFIQFAGLPQSAQIGGT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001610__    351 RPGKMTQDRITSILYRLTFVGSIFLAVISILPIFFIQFAGLPQSAQIGGT    400

BSNT_00240___    401 SLLIVVGVALETMKQLESQLVKRNYRGFMKN    431
                     |||||||||||||||||||||||||||||||
RBAM_001610__    401 SLLIVVGVALETMKQLESQLVKRNYRGFMKN    431


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