Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00251 and RBAM_001710

See DNA alignment / Visit BSNT_00251 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:03
# Commandline: needle
#    -asequence pep-align/BSNT_00251___ybaE.1.9828.seq
#    -bsequence pep-align/RBAM_001710___cbiO.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00251___ybaE-RBAM_001710___cbiO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00251___ybaE-RBAM_001710___cbiO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00251___ybaE
# 2: RBAM_001710___cbiO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 276
# Identity:     233/276 (84.4%)
# Similarity:   257/276 (93.1%)
# Gaps:           0/276 ( 0.0%)
# Score: 1207.0
# 
#
#=======================================

BSNT_00251___      1 MKTPFERLALYDINASIKEGSYVAVIGHTGSGKSTLLQHLNGLLKPTKGQ     50
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
RBAM_001710__      1 MKTPFERLALYDINAVIKEGSYVAVIGHTGSGKSTLLQHLNGLLKPTKGQ     50

BSNT_00251___     51 ISLGSTVIQAGKKNKDLKKLRKKVGIVFQFPEHQLFEETVLKDISFGPMN    100
                     :.|.||::.|||||||||.|||||||||||||||||||||||||:|||||
RBAM_001710__     51 LELESTILAAGKKNKDLKTLRKKVGIVFQFPEHQLFEETVLKDIAFGPMN    100

BSNT_00251___    101 FGVKKEDAEQKAREMLQLVGLSEELLDRSPFELSGGQMRRVAIAGVLAMD    150
                     |||||||||:||:|||.||||.|::||||||||||||||||||||||||:
RBAM_001710__    101 FGVKKEDAERKAKEMLGLVGLPEDILDRSPFELSGGQMRRVAIAGVLAME    150

BSNT_00251___    151 PEVLVLDEPTAGLDPRGRKEIMDMFYELHQRGNLTTILVTHSMEDAAAYA    200
                     ||||||||||||||||||:|||||||.|||||||||:||||||||||.||
RBAM_001710__    151 PEVLVLDEPTAGLDPRGRQEIMDMFYALHQRGNLTTVLVTHSMEDAARYA    200

BSNT_00251___    201 DEMIVMHKGTIQASGSPRDLFLKGEEMAGWGLDLPETIKFQRHLEAVLGV    250
                     |||||||||||:|:|||||||:|||||:..||||||::||||.||..|||
RBAM_001710__    201 DEMIVMHKGTIKATGSPRDLFVKGEEMSEMGLDLPESVKFQRRLEKALGV    250

BSNT_00251___    251 RFNEPMLTIEDAAAEIRALFQGEKTL    276
                     ::.:||||::|||:||:|.||.||..
RBAM_001710__    251 KYEKPMLTLQDAASEIKAFFQEEKDQ    276


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