Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00264 and RBAM_001810

See DNA alignment / Visit BSNT_00264 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:04
# Commandline: needle
#    -asequence pep-align/BSNT_00264___gerD.1.9828.seq
#    -bsequence pep-align/RBAM_001810___gerD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00264___gerD-RBAM_001810___gerD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00264___gerD-RBAM_001810___gerD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00264___gerD
# 2: RBAM_001810___gerD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 185
# Identity:     157/185 (84.9%)
# Similarity:   171/185 (92.4%)
# Gaps:           0/185 ( 0.0%)
# Score: 817.0
# 
#
#=======================================

BSNT_00264___      1 MSKAKTLLMSCFLLLSVTACAPKDQAADMDYDQTKKMVVDILKTDDGKKA     50
                     ||||||||:|||:|||||||||||||||||||||||||||||||||||||
RBAM_001810__      1 MSKAKTLLISCFVLLSVTACAPKDQAADMDYDQTKKMVVDILKTDDGKKA     50

BSNT_00264___     51 IKELLNDDAMNEALVIDQDAIKGTIEKTLTSKKGEEFWKNIFEDTDFAEG    100
                     |||:||||||||||||||:|:|||||||||||||.||||.||||:.|||.
RBAM_001810__     51 IKEILNDDAMNEALVIDQNAVKGTIEKTLTSKKGAEFWKTIFEDSKFAES    100

BSNT_00264___    101 FAKTLQTEHEKVIKKLMKDPDYQKMLMSVMQDPGMDKKYSQLAKSQEFRS    150
                     ||||||.||||:||||||||||||..|.:||||||||||.:|.|||:|||
RBAM_001810__    101 FAKTLQPEHEKIIKKLMKDPDYQKSFMQIMQDPGMDKKYYELVKSQKFRS    150

BSNT_00264___    151 YLEEVINETLSSPLYKKQFEDELKKAAKDTAKESE    185
                     |||:||.|||||||:||||||||||||..:.|||:
RBAM_001810__    151 YLEDVITETLSSPLFKKQFEDELKKAASSSEKESQ    185


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