Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00265 and RBAM_001820

See DNA alignment / Visit BSNT_00265 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:04
# Commandline: needle
#    -asequence pep-align/BSNT_00265.1.9828.seq
#    -bsequence pep-align/RBAM_001820___kbaA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00265-RBAM_001820___kbaA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00265-RBAM_001820___kbaA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00265
# 2: RBAM_001820___kbaA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 222
# Identity:     173/222 (77.9%)
# Similarity:   183/222 (82.4%)
# Gaps:          24/222 (10.8%)
# Score: 896.0
# 
#
#=======================================

BSNT_00265         1 MIHLFGIIHNKISLFAIFEGMNKEMKSRGLVRFFFSILAVGALITSIVGF     50
                                             ||||||||||||||||||||||:|||
RBAM_001820__      1 ------------------------MKSRGLVRFFFSILAVGALITSVVGF     26

BSNT_00265        51 ALKWGEYRGLFLTFEAGQIFSVLFWFIGVGMIFSVISQMGFFVFLTVHRF    100
                     |||||||:|.||.||||||||||.||||||||||||||||||||||||||
RBAM_001820__     27 ALKWGEYKGFFLNFEAGQIFSVLIWFIGVGMIFSVISQMGFFVFLTVHRF     76

BSNT_00265       101 ALEILRSSSLWNLLQLFFILFVAFDLMYVRFLFFGESGESLAGYAWLPMF    150
                     |||||||||||||||||.||||||||||||||||||..:|:||:.|||:.
RBAM_001820__     77 ALEILRSSSLWNLLQLFIILFVAFDLMYVRFLFFGERDDSIAGFVWLPLA    126

BSNT_00265       151 LLIFGVITAYIKQKQSSKKTFVSSLFLMVVITALEWFPALRVNDEDWLYL    200
                     ||..|::|||||||||||.|||||||||||||||||.||||||:||||||
RBAM_001820__    127 LLAVGLLTAYIKQKQSSKNTFVSSLFLMVVITALEWVPALRVNNEDWLYL    176

BSNT_00265       201 MLFPLMACNAFQLLMLPKFAAK    222
                     ||.|||.|||||||||||||.:
RBAM_001820__    177 MLIPLMGCNAFQLLMLPKFAQR    198


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