Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00308 and RBAM_002090
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:05
# Commandline: needle
# -asequence pep-align/BSNT_00308.1.9828.seq
# -bsequence pep-align/RBAM_002090___ybaA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00308-RBAM_002090___ybaA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00308-RBAM_002090___ybaA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00308
# 2: RBAM_002090___ybaA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 250
# Identity: 109/250 (43.6%)
# Similarity: 155/250 (62.0%)
# Gaps: 40/250 (16.0%)
# Score: 601.0
#
#
#=======================================
BSNT_00308 1 MKGSLSEHKAGNRRFTLYLPPSYSTDSGGFPAVYVQDGSSLFQNQIELLE 50
:|..|::.||
RBAM_002090__ 1 ----------------------------------------MFLEQMDKLE 10
BSNT_00308 51 SAFQQQRLPELVLIGIEPENRLDEYTPWPAASLSDRFTDFGGMGYHYLSD 100
|.|....||||:.|||:|.:||||||||||.|||..|.||||.|..:|.:
RBAM_002090__ 11 SQFANGTLPELIFIGIKPADRLDEYTPWPAPSLSPAFHDFGGKGRLFLEE 60
BSNT_00308 101 ITNQFIPLIEENWNVTREPQSRGMIGASLGGLISMFAILKYPSMFGKIGS 150
:||..||.:|:..:::..|::||:||||||||.|::|:|:.|.:||:||.
RBAM_002090__ 61 LTNVIIPTVEDMHHISAHPETRGLIGASLGGLFSIYAMLQKPEIFGRIGC 110
BSNT_00308 151 ISGSYWYENAAETIHISSLKPGTARVFMSIGSEEGCEKQSIQRHMLKKTK 200
||||:|||.:|:.:..:||:|...|::||:||.|...|.:||.:|::..|
RBAM_002090__ 111 ISGSFWYEKSADYVRSASLRPARRRIYMSVGSREAEHKNNIQNNMIRLNK 160
BSNT_00308 201 QVHQSLKEKGFTEDQLCLSIEKGAVHHRKYFCKQFINALEWLYGKNRSTL 250
.|::||:||||::.||..:||:|||||::.|.:||..||.||||||||..
RBAM_002090__ 161 DVYESLREKGFSQSQLSFTIEEGAVHHQEAFKRQFNAALSWLYGKNRSRS 210
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