Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00309 and RBAM_002100

See DNA alignment / Visit BSNT_00309 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:05
# Commandline: needle
#    -asequence pep-align/BSNT_00309.1.9828.seq
#    -bsequence pep-align/RBAM_002100___feuC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00309-RBAM_002100___feuC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00309-RBAM_002100___feuC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00309
# 2: RBAM_002100___feuC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 340
# Identity:     276/340 (81.2%)
# Similarity:   314/340 (92.4%)
# Gaps:           4/340 ( 1.2%)
# Score: 1444.0
# 
#
#=======================================

BSNT_00309         1 ----MAKKYALFSALILVVSYFSLTSGSFSVRPAELLSTLFQIDPNPQYE     46
                         ||..|.:..||||:|||||:||||||.:|.|||||||:|.|||||:
RBAM_002100__      1 MVRKMAGIYIILIALILLVSYFSMTSGSFSAKPGELLSTLFRIHPNPQYD     50

BSNT_00309        47 ILLFDLRLPRVVMAAIIGLGLGIAGAVIQAITRNGLADPGILGINAGAGA     96
                     ||||.|||||:||||.|||||||:||||||||:|||||||||||||||||
RBAM_002100__     51 ILLFQLRLPRIVMAAAIGLGLGISGAVIQAITKNGLADPGILGINAGAGA    100

BSNT_00309        97 GIVAFMLLFQGQKEVTSIAAAMGMPLFGLIGGLIAAILIYIFAWHRGNLD    146
                     |||.||||||||.|.|::|:|||||:|||||||:||:||||||||||:|:
RBAM_002100__    101 GIVTFMLLFQGQSEATALASAMGMPVFGLIGGLMAAVLIYIFAWHRGHLE    150

BSNT_00309       147 SRRIILVGIAINSGFSALSLFLSLKMDPQDYQMAMVWKNGSIWSANWTYI    196
                     |.||||||||:||||||||||||||||||||:|||||||||||||||..|
RBAM_002100__    151 SGRIILVGIAMNSGFSALSLFLSLKMDPQDYEMAMVWKNGSIWSANWMTI    200

BSNT_00309       197 TAVLPWMLLFIPILIGKSRLLDTIRFDEDTVRSLGISSNKEKTILLVACV    246
                     ||:|||::||||:|:.|:.||||||||||||:|||:|:||||||||:||:
RBAM_002100__    201 TAILPWLILFIPLLMAKTSLLDTIRFDEDTVKSLGVSTNKEKTILLIACI    250

BSNT_00309       247 AIISACVSVAGSMAFVGLIAPHISRRLAGVEHRYILPLSGLIGMLLVISA    296
                     |:|||||:.||||||||||||||||||||:||||.||:|||:||||||||
RBAM_002100__    251 ALISACVTAAGSMAFVGLIAPHISRRLAGIEHRYSLPVSGLVGMLLVISA    300

BSNT_00309       297 DFAGKLFFQPAEVPAGIILAILGVPYFLYLLFKQKKGENA    336
                     ||||||||||:||||||||||||||||.:||||||||.:|
RBAM_002100__    301 DFAGKLFFQPSEVPAGIILAILGVPYFFFLLFKQKKGLDA    340


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