Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00315 and RBAM_002140

See DNA alignment / Visit BSNT_00315 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:06
# Commandline: needle
#    -asequence pep-align/BSNT_00315___ybbC.1.9828.seq
#    -bsequence pep-align/RBAM_002140___ybbC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00315___ybbC-RBAM_002140___ybbC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00315___ybbC-RBAM_002140___ybbC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00315___ybbC
# 2: RBAM_002140___ybbC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 414
# Identity:     314/414 (75.8%)
# Similarity:   354/414 (85.5%)
# Gaps:           0/414 ( 0.0%)
# Score: 1676.0
# 
#
#=======================================

BSNT_00315___      1 MRKTIFAFLTGLMMFGTITAASASPDSKNQTAKKPKVQTGIDTLLPDYKK     50
                     |:....|.|.||::...:||.||:.|....|||||.:|||||.||.|||:
RBAM_002140__      1 MKTQTAALLAGLVVISAMTAVSAASDRNLHTAKKPSIQTGIDRLLKDYKQ     50

BSNT_00315___     51 QLKGKRIGLITNPTGVNASLKSSVDILYENPDIKLTALFGPEHGVRGDAQ    100
                     :|||||:||||||||||.|||||||:|||.|||.||||||||||||||||
RBAM_002140__     51 ELKGKRVGLITNPTGVNNSLKSSVDVLYEAPDIHLTALFGPEHGVRGDAQ    100

BSNT_00315___    101 AGDEVGSYIDEKTGVPVYSLYGKTKKPTPEMLKNVDILMFDIQDVGTRFY    150
                     |||:|.||||||||:|||||||:|:||||:|||:.|:|:|||||||||:|
RBAM_002140__    101 AGDKVTSYIDEKTGLPVYSLYGETRKPTPDMLKDTDVLIFDIQDVGTRYY    150

BSNT_00315___    151 TYIYTMAYAMEAAKENGIPFMVLDRPNPQGGNHIEGPILEPDYASFVGLY    200
                     |||||||||||||||.||||.||||||||||.:.:||:||||||||||||
RBAM_002140__    151 TYIYTMAYAMEAAKEKGIPFYVLDRPNPQGGRNPDGPVLEPDYASFVGLY    200

BSNT_00315___    201 PIPLKHGMTIGELALLFNKEFSINADLTVVKMKHWKRKMDFDDTRLPFVL    250
                     |||||||||||||||||||||.|.|||||||||.|||.|..:||.|||||
RBAM_002140__    201 PIPLKHGMTIGELALLFNKEFHIGADLTVVKMKRWKRTMTIEDTGLPFVL    250

BSNT_00315___    251 PSPNMPTVESTFVYPATGLIEGTNISEGRGTTKPFELIGAPFIKSTELEE    300
                     ||||:||.:|.|.|.|||||||||:||||||||||||||||::|||||||
RBAM_002140__    251 PSPNIPTPDSIFAYSATGLIEGTNVSEGRGTTKPFELIGAPYMKSTELEE    300

BSNT_00315___    301 TLNSLHLPGVTFRAASFTPTFSKHQGTLCHGVQLYVTERDKFEAVKTGLS    350
                     .||||.|||||||||||.|:|||||..||||||:|||.|:.|||.|||||
RBAM_002140__    301 RLNSLKLPGVTFRAASFIPSFSKHQSKLCHGVQVYVTNRNTFEAAKTGLS    350

BSNT_00315___    351 VIKTIHDLYPEDFEFLSTGSFDKLAGNGWIRTKIENGTSIENIINSYEKT    400
                     ::||:|||||.||.||.|||||||.||||:|.|||.|.|||:|..:|::.
RBAM_002140__    351 ILKTMHDLYPNDFLFLPTGSFDKLIGNGWVRKKIEKGASIEDITGTYQRR    400

BSNT_00315___    401 LQQFSKTRKKYLIY    414
                     |.||...||:||||
RBAM_002140__    401 LDQFKTLRKQYLIY    414


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