Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00378 and RBAM_002610

See DNA alignment / Visit BSNT_00378 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:09
# Commandline: needle
#    -asequence pep-align/BSNT_00378___glpT.1.9828.seq
#    -bsequence pep-align/RBAM_002610___glpT.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00378___glpT-RBAM_002610___glpT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00378___glpT-RBAM_002610___glpT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00378___glpT
# 2: RBAM_002610___glpT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 444
# Identity:     421/444 (94.8%)
# Similarity:   436/444 (98.2%)
# Gaps:           1/444 ( 0.2%)
# Score: 2254.0
# 
#
#=======================================

BSNT_00378___      1 MLNIFKPAPHIERLDDSKMDAAYKRLRLQVFIGIFIGYAGYYLLRKNFAF     50
                     |..:||||||||||||||.||||||||||||:||||||||||||||||||
RBAM_002610__      1 MFQLFKPAPHIERLDDSKTDAAYKRLRLQVFLGIFIGYAGYYLLRKNFAF     50

BSNT_00378___     51 AIPYLQEQGFSKTELGLVLAAVSIAYGFSKFIMGMVSDRCNPRYFLATGL    100
                     ||||.|||||||.|||||||||||||||||||||||||||||||||||||
RBAM_002610__     51 AIPYFQEQGFSKGELGLVLAAVSIAYGFSKFIMGMVSDRCNPRYFLATGL    100

BSNT_00378___    101 FLSAIVNILFVSMPWVTSSVTIMFIFMFINGWFQGMGWPPCGRTMAHWFS    150
                     |||.:|||||||||||||||||||||||||||||||||||||||||||||
RBAM_002610__    101 FLSGVVNILFVSMPWVTSSVTIMFIFMFINGWFQGMGWPPCGRTMAHWFS    150

BSNT_00378___    151 ISERGTKMSIWNVAHNIGGGILAPLVTLGIAMFVTWKSVFFFPAIIAIII    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||:|
RBAM_002610__    151 ISERGTKMSIWNVAHNIGGGILAPLVTLGIAMFVTWKSVFFFPAIIAIVI    200

BSNT_00378___    201 SFLIVLLVRDTPQSCGLPPIEEYRNDYPKHAFKNQEKELTTKEILFQYVL    250
                     ||:||||||||||||||||||||||||||||||:||||:|||||||:|||
RBAM_002610__    201 SFVIVLLVRDTPQSCGLPPIEEYRNDYPKHAFKDQEKEMTTKEILFKYVL    250

BSNT_00378___    251 NNKFLWYIAFANVFVYFVRYGVVDWAPTYLTEAKGFSPEDSRWSYFLYEY    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_002610__    251 NNKFLWYIAFANVFVYFVRYGVVDWAPTYLTEAKGFSPEDSRWSYFLYEY    300

BSNT_00378___    301 AGIPGTILCGWISDRFFKSRRAPAGVLFMAG-XIAVLVYWLNPAGNPLVD    349
                     |||||||||||||||||||||||||||||||  ||||||||||||:||:|
RBAM_002610__    301 AGIPGTILCGWISDRFFKSRRAPAGVLFMAGVFIAVLVYWLNPAGHPLID    350

BSNT_00378___    350 NIALISIGFLIYGPVMLIGLQAIDLAPKKAAGTAAGLTGFFGYIGGSAFA    399
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_002610__    351 NIALISIGFLIYGPVMLIGLQAIDLAPKKAAGTAAGLTGFFGYIGGSAFA    400

BSNT_00378___    400 NAIMGFVVDRFNWNGGFIMLISSCILAIVFLALTWNTGKRAEHV    443
                     |||||:|||||:||||||||||||:|:|||||:|||||||||||
RBAM_002610__    401 NAIMGYVVDRFDWNGGFIMLISSCVLSIVFLAMTWNTGKRAEHV    444


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