Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00503 and RBAM_003100
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:15
# Commandline: needle
# -asequence pep-align/BSNT_00503.1.9828.seq
# -bsequence pep-align/RBAM_003100___ycdG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00503-RBAM_003100___ycdG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00503-RBAM_003100___ycdG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00503
# 2: RBAM_003100___ycdG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 562
# Identity: 264/562 (47.0%)
# Similarity: 305/562 (54.3%)
# Gaps: 207/562 (36.8%)
# Score: 1480.0
#
#
#=======================================
BSNT_00503 1 MKTDWWKDAVVYQIYPRSFQDSDGDGIGDLRGIISRLDYIKELGADVIWI 50
|.:||||||||||||||||||::|||||||||||:|||||||||||||||
RBAM_003100__ 1 MASDWWKDAVVYQIYPRSFQDTNGDGIGDLRGIIARLDYIKELGADVIWI 50
BSNT_00503 51 CPIYPSPNVDYGYDVTNHKAIMDSYGTMDDFHELLDQVHQRGLKLVMDFV 100
||||||||||.|||||:|:|||:|||||:|||:||.:...||||||||||
RBAM_003100__ 51 CPIYPSPNVDNGYDVTDHQAIMESYGTMEDFHDLLTECRSRGLKLVMDFV 100
BSNT_00503 101 LNHTSVEHPWFKEAELDKNSKYRSYYYWRPGTKNGPPTDWLSNYGCPVWQ 150
|||||.|||||||||::.:||||.||.|||||.:||||||:|:||..|||
RBAM_003100__ 101 LNHTSTEHPWFKEAEMNPDSKYRDYYIWRPGTADGPPTDWVSDYGQSVWQ 150
BSNT_00503 151 YEEHTGEYYLHMNAVKQADLNWENPEVRQAVYDMMKFWLDKGVDGLRIDQ 200
|||||||||||||||||||||||||||||:||:||:||||||||||||||
RBAM_003100__ 151 YEEHTGEYYLHMNAVKQADLNWENPEVRQSVYEMMRFWLDKGVDGLRIDQ 200
BSNT_00503 201 LHLISKKEYLPSYEDYINQQAEPKPFQPNGEQIHDYLKEMTDEVFSQYDV 250
|||:|||||||.|||||.::|:||||:|||.:|||||||||.||||:|:|
RBAM_003100__ 201 LHLLSKKEYLPPYEDYIARRADPKPFRPNGARIHDYLKEMTKEVFSKYNV 250
BSNT_00503 251 MSVGEVGSVTPEEGLKFTGTDKHELNMIFHFQHMELDQQPGKEHWDLKPL 300
|||||.|||||||||.:||||:||||||||||||||||:||:||||:|||
RBAM_003100__ 251 MSVGEAGSVTPEEGLVYTGTDEHELNMIFHFQHMELDQKPGQEHWDVKPL 300
BSNT_00503 301 ELSDLKSVLTKWQRSLNIKAGIHCFGATTTSPGLCPDSETMGNTAKHQRK 350
||||||.|||.||..|..:.....:......|.:. ...|:...:::.
RBAM_003100__ 301 ELSDLKKVLTDWQEKLEHQGWNTLYWCNHDQPRIV---SRFGDEGTYRKA 347
BSNT_00503 351 CWQPYFIL------------------------------------------ 358
..:...:|
RBAM_003100__ 348 SAKMLAVLLYFMKGTPYIYQGEEIGMTNAPFDRIEDYQDIQTVNMYHKRV 397
BSNT_00503 358 -------------------------------------------------- 358
RBAM_003100__ 398 FEMGRNREEVMVSIMAKSRDHARTPMQWDGSKNAGFTKGEPWLKVNPNYK 447
BSNT_00503 358 -------------------------------------------------- 358
RBAM_003100__ 448 TVNAAEAQDDPDSVLNFYKKLIRLRKQYADVIKGSYTLLLPDDPQLFVYE 497
BSNT_00503 358 -------------------------------------------------- 358
RBAM_003100__ 498 RQANGQKLISISNVSKEEAVFYWPDGSKPESAELLLSNYDNDSGTESRIA 547
BSNT_00503 358 ------------ 358
RBAM_003100__ 548 FHPYETRVYLLA 559
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