Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00532 and RBAM_003260
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:17
# Commandline: needle
# -asequence pep-align/BSNT_00532.1.9828.seq
# -bsequence pep-align/RBAM_003260___ycgA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00532-RBAM_003260___ycgA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00532-RBAM_003260___ycgA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00532
# 2: RBAM_003260___ycgA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 478
# Identity: 372/478 (77.8%)
# Similarity: 404/478 (84.5%)
# Gaps: 48/478 (10.0%)
# Score: 1883.0
#
#
#=======================================
BSNT_00532 1 MSMPAAETQPKKKRMTFKMPDAYVLLFMIAFICAIASYIVPAGEFDRVTK 50
:||
RBAM_003260__ 1 -----------------------------------------------MTK 3
BSNT_00532 51 GDVTTAVPGSYHSIEQSPVSLISFFTSLQDGMVGSAPIIFLILFTGGTIA 100
|.||:||||||||::|||||.|:|||::|:||..||||||||||||||||
RBAM_003260__ 4 GSVTSAVPGSYHSLDQSPVSPIAFFTAIQEGMTSSAPIIFLILFTGGTIA 53
BSNT_00532 101 ILEKTGAINGLIYNVISKFRTKQLLFICIVGALFSILGTTGIVVNSVIGF 150
||||||||||||.||||.|||||||||.|||:||||||||||||||||||
RBAM_003260__ 54 ILEKTGAINGLISNVISTFRTKQLLFIAIVGSLFSILGTTGIVVNSVIGF 103
BSNT_00532 151 IPIGLIVARSLKWDAVAGAAVIYIGCYAGFNSTILSPSPLGLSQSIAELP 200
|||||||||||||||||||||||||||||||:||||||||||||||||||
RBAM_003260__ 104 IPIGLIVARSLKWDAVAGAAVIYIGCYAGFNATILSPSPLGLSQSIAELP 153
BSNT_00532 201 LFSGIGLRVVIYICFLLSSIIYIYLYTRKLKKSKDASVLGTDWFPAAG-M 249
||||||||:.:|||||||||:|||.|||||:|:||||:||.||||||| :
RBAM_003260__ 154 LFSGIGLRIAVYICFLLSSILYIYRYTRKLRKAKDASLLGNDWFPAAGSL 203
BSNT_00532 250 GEAGKEEDQPVPFTVRHKLILAVAGLSLVGFLYGALKLGWSDSQMAATFI 299
.:..:.||:.||||||||||||||.|||.|||||||.||||||:|||.||
RBAM_003260__ 204 PQVSEPEDKHVPFTVRHKLILAVAALSLAGFLYGALTLGWSDSEMAAVFI 253
BSNT_00532 300 FISVLAGLIGRLAANDIAKTFITGCQSLVYGALIVGMARSISVILENGKL 349
|||:::|||..:||||||||||||||.|||||||||||||||||||:|||
RBAM_003260__ 254 FISIVSGLIAGMAANDIAKTFITGCQGLVYGALIVGMARSISVILEHGKL 303
BSNT_00532 350 LDTVVNALASLLDGFSPIAGAIGMYIASALLHFLISSGSGEAVVFIPILA 399
||||||.|||||.||||:||||||||:|||||||||||||||||||||||
RBAM_003260__ 304 LDTVVNGLASLLHGFSPMAGAIGMYISSALLHFLISSGSGEAVVFIPILA 353
BSNT_00532 400 PLADLMEITRQVAVEAVMLGEGVVNCVNPTSGVLMAVLAASGIPYVKWLR 449
||||||.|||||||||||||||||||||||||||||||||||||||||||
RBAM_003260__ 354 PLADLMGITRQVAVEAVMLGEGVVNCVNPTSGVLMAVLAASGIPYVKWLR 403
BSNT_00532 450 FMVPLALIWFLIGLVFIVIGVMINWGPF 477
||:|||||||:||||||.|||:|||||:
RBAM_003260__ 404 FMIPLALIWFVIGLVFICIGVLINWGPY 431
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