Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00545 and RBAM_003330
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:17
# Commandline: needle
# -asequence pep-align/BSNT_00545___ycgG.1.9828.seq
# -bsequence pep-align/RBAM_003330___yqcI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00545___ycgG-RBAM_003330___yqcI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00545___ycgG-RBAM_003330___yqcI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00545___ycgG
# 2: RBAM_003330___yqcI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 265
# Identity: 194/265 (73.2%)
# Similarity: 217/265 (81.9%)
# Gaps: 20/265 ( 7.5%)
# Score: 1085.5
#
#
#=======================================
BSNT_00545___ 1 MRWINGEWDLHQKFSGTYSG--------ELPEWQRIAFELLAETLGDDAD 42
..|..|:. :||.|||:|||||:||:||.||
RBAM_003330__ 1 ------------MASELYTKSCLEEKLLDLPNWQRVAFELLSETIGDKAD 38
BSNT_00545___ 43 TFPCIPGRQAFLTDQLRIAFAGDPRENRTAEELAPLLAEYGKISRDTGKY 92
|||||||||.||||||||:|||||||..|.||:..||:|||||||:||:|
RBAM_003330__ 39 TFPCIPGRQGFLTDQLRISFAGDPREEGTPEEVGMLLSEYGKISRNTGRY 88
BSNT_00545___ 93 ASLVVLFDTPEDLAEHYSIEAYEELFWRFLNRLSHQDEKEWPEDIPADPE 142
|||:|:||||||||||||:||||||||.||||||..|.|:||||:|.|||
RBAM_003330__ 89 ASLLVIFDTPEDLAEHYSVEAYEELFWSFLNRLSGCDPKDWPEDMPEDPE 138
BSNT_00545___ 143 HYKWEFCFDGEPYFLLCATPAHEARKSRSFPFFMITFQPRWVFEDLNGST 192
||||||||||||||:||||||||||:||||||||:.||||||||.||.||
RBAM_003330__ 139 HYKWEFCFDGEPYFILCATPAHEARQSRSFPFFMLAFQPRWVFEGLNDST 188
BSNT_00545___ 193 AFGRNMSRLIRSRLEAYDQAPIHPQLGWYGGKDNREWKQYFLRDDEKQVS 242
|||||||||||.||||||:||:||:|||||||||.|||||||||||.:||
RBAM_003330__ 189 AFGRNMSRLIRKRLEAYDEAPLHPRLGWYGGKDNLEWKQYFLRDDETEVS 238
BSNT_00545___ 243 KCPFSYLKNMFNKMK 257
||||||||.:|...|
RBAM_003330__ 239 KCPFSYLKRLFKPTK 253
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