Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00626 and RBAM_003680

See DNA alignment / Visit BSNT_00626 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:21
# Commandline: needle
#    -asequence pep-align/BSNT_00626___srfAC.1.9828.seq
#    -bsequence pep-align/RBAM_003680___srfAC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00626___srfAC-RBAM_003680___srfAC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00626___srfAC-RBAM_003680___srfAC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00626___srfAC
# 2: RBAM_003680___srfAC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1278
# Identity:    1111/1278 (86.9%)
# Similarity:  1182/1278 (92.5%)
# Gaps:          14/1278 ( 1.1%)
# Score: 5809.0
# 
#
#=======================================

BSNT_00626___      1 -----------MYYLSPMQEGMLFHAILNPGQSFYLEQITMKVKGSLNIK     39
                                ||||||||||||||.:||||||||:||:|||||||||||
RBAM_003680__      1 MSQFSKDQVQDMYYLSPMQEGMLFHTLLNPGQSFYIEQMTMKVKGSLNIK     50

BSNT_00626___     40 CLEESMNVIMDRYDVFRTVFIHEKVKRPVQVVLKKRQFHIEEIDLTHLTG     89
                     .|||||||||||||||||||||||||||||||||||||.||||||||:|.
RBAM_003680__     51 SLEESMNVIMDRYDVFRTVFIHEKVKRPVQVVLKKRQFQIEEIDLTHVTD    100

BSNT_00626___     90 SEQTAKINEYKEQDKIRGFDLTRDIPMRAAIFKKAEESFEWVWSYHHIIL    139
                     ||||||||||||||||:|||||||||||||||||:|||||||||||||||
RBAM_003680__    101 SEQTAKINEYKEQDKIKGFDLTRDIPMRAAIFKKSEESFEWVWSYHHIIL    150

BSNT_00626___    140 DGWCFGIVVQDLFKVYNALREQKPYSLPPVKPYKDYIKWLEKQDKQASLR    189
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
RBAM_003680__    151 DGWCFGIVVQDLFKVYNALREQKPYSLPPVKPYKDYIKWLEKQDKQASLH    200

BSNT_00626___    190 YWREYLEDFEGQTTFAEQRKKQKDGYEPKELLFSLPEAETKAFTELAKSQ    239
                     |||.|||.||||||||||||||||||||||||||||||||||||||||||
RBAM_003680__    201 YWRGYLEGFEGQTTFAEQRKKQKDGYEPKELLFSLPEAETKAFTELAKSQ    250

BSNT_00626___    240 HTTLSTALQAVWSVLISRYQQSGDLAFGTVVSGRPAEIKGVEHMVGLFIN    289
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
RBAM_003680__    251 HTTLSTALQAVWSVLISRYQQSGDLIFGTVVSGRPAEIKGVEHMVGLFIN    300

BSNT_00626___    290 VVPRRVKLSEGITFNGLLKQLQEQSLQSEPHQYVPLYDIQSQADQPKLID    339
                     .|||||||||..||||||||||||||||||||||||||||||||||||||
RBAM_003680__    301 AVPRRVKLSEDTTFNGLLKQLQEQSLQSEPHQYVPLYDIQSQADQPKLID    350

BSNT_00626___    340 HIIVFENYPLQDAKNEESSENGFDMVDVHVFEKSNYDLNLMASPGDEMLI    389
                     |||||||||||||||||:|||||||.||||||||||||||||||||||||
RBAM_003680__    351 HIIVFENYPLQDAKNEENSENGFDMEDVHVFEKSNYDLNLMASPGDEMLI    400

BSNT_00626___    390 KLAYNENVFDEAFILRLKSQLLTAIQQLIQNPDQPVSTINLVDDREREFL    439
                     |||||.||||||||||||||||||||||||.|||||:||.|||::|||.|
RBAM_003680__    401 KLAYNGNVFDEAFILRLKSQLLTAIQQLIQKPDQPVNTIRLVDEKERELL    450

BSNT_00626___    440 LTGLNPPAQAHETKPLTDWFKEAVNVNPDAPALTYSGQTLSYRELDEEAN    489
                     |||||||||.|:.|||||||||||||||||||||||||||||.|||||||
RBAM_003680__    451 LTGLNPPAQTHQAKPLTDWFKEAVNVNPDAPALTYSGQTLSYCELDEEAN    500

BSNT_00626___    490 RLARRLQKHGAGKGSVVALYTKRSLELVIGILGVLKAGAAYLPVDPKLPE    539
                     ||||||||.||||.:|||||||||||||||||||||||||||||||||||
RBAM_003680__    501 RLARRLQKQGAGKDTVVALYTKRSLELVIGILGVLKAGAAYLPVDPKLPE    550

BSNT_00626___    540 DRISYMLADSAAACLLTHQKMKEQAAELPYTGTTLFIDDQTRFEEQASDP    589
                     |||||||||||||||||||:|||:||:||||||||.||||.|||||||||
RBAM_003680__    551 DRISYMLADSAAACLLTHQEMKEKAAQLPYTGTTLIIDDQARFEEQASDP    600

BSNT_00626___    590 ATAIDPNDPAYIMYTSGTTGKPKGNITTHANIQGLVKHVDYMAFSEKDTF    639
                     |.||||:|||||||||||||||||||||||||||||||||||||||||||
RBAM_003680__    601 AAAIDPDDPAYIMYTSGTTGKPKGNITTHANIQGLVKHVDYMAFSEKDTF    650

BSNT_00626___    640 LSVSNYAFDAFTFDFYASMLNAARLIIADEHTLLDTERLTDLILQENVNV    689
                     ||||||||||||||||||:||||||||||||||||||||||||.||||||
RBAM_003680__    651 LSVSNYAFDAFTFDFYASILNAARLIIADEHTLLDTERLTDLIRQENVNV    700

BSNT_00626___    690 MFATTALFNLLTDAGEDWMKGLRCILFGGERASVPHVRKALRVMGPGKLI    739
                     ||||||||||||||||:|:|||||:||||||||||||||||.:|||||||
RBAM_003680__    701 MFATTALFNLLTDAGEEWLKGLRCVLFGGERASVPHVRKALEIMGPGKLI    750

BSNT_00626___    740 NCYGPTEGTVFATAHVVHDIPDSISSLPIGKPISNASVYILNEQSQLQPF    789
                     |||||||||||||||||||||||:||||||||||||||||||.|:|||||
RBAM_003680__    751 NCYGPTEGTVFATAHVVHDIPDSLSSLPIGKPISNASVYILNGQNQLQPF    800

BSNT_00626___    790 GAIGELCISGMGVSKGYVNRADLTKEKFIKNPFKPGETLYRTGDLARWLP    839
                     ||:||||||||||||||:||.||||:.||.||||||||||||||||||||
RBAM_003680__    801 GAVGELCISGMGVSKGYLNRHDLTKQTFIPNPFKPGETLYRTGDLARWLP    850

BSNT_00626___    840 DGTIEYAGRIDDQVKIRGHRIELEEIEKQLQEYPGVKDAVVVADRHESGD    889
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_003680__    851 DGTIEYAGRIDDQVKIRGHRIELEEIEKQLQEYPGVKDAVVVADRHESGD    900

BSNT_00626___    890 ASINAYLVNRTQLSAEDVKAHLKKQLPAYMVPQTFTFLDELPLTTNGKVN    939
                     |||||||||||.|||||||.||||||||||||||||||:|||||||||||
RBAM_003680__    901 ASINAYLVNRTPLSAEDVKRHLKKQLPAYMVPQTFTFLEELPLTTNGKVN    950

BSNT_00626___    940 KRLLPKPDQDQLAEEWIGPRNDMEETIAQIWSEVLGRKQIGIHDDFFALG    989
                     ||.||||||.|.|:|||||||..|||||.|||::|||:||||||||||||
RBAM_003680__    951 KRQLPKPDQAQAAKEWIGPRNATEETIAHIWSDILGRQQIGIHDDFFALG   1000

BSNT_00626___    990 GHSLKAMTAASRIKKELGIDLPVKLLFEAPTIAGISAYVKNGGPDGLQNV   1039
                     ||||||||||||||||||.|:||:|||||.|||.|:.|:.:|...|::::
RBAM_003680__   1001 GHSLKAMTAASRIKKELGTDIPVQLLFEATTIADIAGYLLHGEEKGMKDL   1050

BSNT_00626___   1040 TIMNQDQEQIIFAFPPVLGYGLMYQNLSSRLPSYKLCAFDFIEEEDRLDR   1089
                     ||||::|...:|.||||||||||||.|:.:|..||:||||||||::|::|
RBAM_003680__   1051 TIMNKNQSDTLFGFPPVLGYGLMYQPLAKQLSGYKICAFDFIEEDNRIER   1100

BSNT_00626___   1090 YADLIQKLQPEGPLTLFGYSAGCSLAFEAAKKLEEQGRIVQRIIMVDSYK   1139
                     |.:||.:||||||:.||||||||:||||.||:||..||.|:|:|||||||
RBAM_003680__   1101 YTELINQLQPEGPVKLFGYSAGCTLAFETAKRLEAGGRKVERLIMVDSYK   1150

BSNT_00626___   1140 KQGVSDLDGRTVESDVEALMNVNRDNEALNSEAVKQGLKQKTHAFYSYYV   1189
                     |||||||:||||||||:|||.|||||||||.||||:||.:||:|||||:|
RBAM_003680__   1151 KQGVSDLEGRTVESDVQALMKVNRDNEALNDEAVKEGLAKKTNAFYSYFV   1200

BSNT_00626___   1190 SLISTGQVKADIDLLTSGAAFDMPEWLASWEEATTGAYRMKRGFGTHAEM   1239
                     ..:|||.|.||||||||...|.||.|||||||||||.||:|:|.||||||
RBAM_003680__   1201 HTVSTGTVNADIDLLTSEPDFAMPPWLASWEEATTGEYRVKKGCGTHAEM   1250

BSNT_00626___   1240 LQGETLDRNAEILLEFLNTQTVTVS---   1264
                     ||||.|:|||..|||||..:.:.::   
RBAM_003680__   1251 LQGECLERNAAYLLEFLKKEHLKLTTSR   1278


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