Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00629 and RBAM_003710

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:22
# Commandline: needle
#    -asequence pep-align/BSNT_00629___ycxB.1.9828.seq
#    -bsequence pep-align/RBAM_003710.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00629___ycxB-RBAM_003710.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00629___ycxB-RBAM_003710.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00629___ycxB
# 2: RBAM_003710
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 192
# Identity:      36/192 (18.8%)
# Similarity:    76/192 (39.6%)
# Gaps:          68/192 (35.4%)
# Score: 183.5
# 
#
#=======================================

BSNT_00629___      1 MIQYASESINLPGEIAFKDVREIFFYQIAKISCFYFLLFCTIFAAVNFIN     50
                                                                     :|
RBAM_003710        1 ------------------------------------------------MN      2

BSNT_00629___     51 GWPRIVYGSDALNLFMNSMLIIVMSVLFTLLLLLLLYVKFSRAYKKNERM    100
                     |  .:..|:..:...:|.:..:::|:..|::...:.:.:..|.||.|:|:
RBAM_003710        3 G--PVTGGTWGVRALLNFLAAVILSLAVTVIATAISFFRLYRTYKTNQRL     50

BSNT_00629___    101 KLKRTYTLNQEGIRICSKKYDLIFNWDEITAVFEYKNIFRVNTSSGQYIA    150
                     |..|:.|::|.||....|...::|.|||:.:..|:|::||:.||....:.
RBAM_003710       51 KSARSITIHQLGISQKQKNASILFEWDELLSAREHKDMFRLQTSGYGTLL    100

BSNT_00629___    151 IPKHFFHSEEEMNRFKEIILKN-------TETKKLKFKKDQH    185
                     :||..|:|::::..|::::.:|       ||           
RBAM_003710      101 LPKRLFYSQKDIAVFRQMLRENVNEKVNVTE-----------    131


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