Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00642 and RBAM_003780
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:23
# Commandline: needle
# -asequence pep-align/BSNT_00642___yckK.1.9828.seq
# -bsequence pep-align/RBAM_003780___yckK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00642___yckK-RBAM_003780___yckK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00642___yckK-RBAM_003780___yckK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00642___yckK
# 2: RBAM_003780___yckK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 268
# Identity: 225/268 (84.0%)
# Similarity: 242/268 (90.3%)
# Gaps: 3/268 ( 1.1%)
# Score: 1149.5
#
#
#=======================================
BSNT_00642___ 1 MKKALLALFMVVSIAALAACGAGNDNQSKDNAKDGDLWASIKKKGVLTVG 50
|||||.||||:||||.|||||...|:.|| :||||||||:|||||||||
RBAM_003780__ 1 MKKALFALFMMVSIAMLAACGNSQDSGSK--SKDGDLWASVKKKGVLTVG 48
BSNT_00642___ 51 TEGTYEPFTYHDKDTDKLTGYDVEVITEVAKRLGLKVDFKETQWDSMFAG 100
|||||||||:|||.||||||||||||.|||||||||.|||||||||||||
RBAM_003780__ 49 TEGTYEPFTFHDKKTDKLTGYDVEVIQEVAKRLGLKADFKETQWDSMFAG 98
BSNT_00642___ 101 LNSKRFDVIANQVGKTDREDKYDFSDKYTTSRAVVVTKKDNNDIKSEADV 150
||:|||||:|||||||.||::||||||||||.||||||||:. |..||||
RBAM_003780__ 99 LNAKRFDVVANQVGKTGRENQYDFSDKYTTSNAVVVTKKDST-IAKEADV 147
BSNT_00642___ 151 KGKTSAQSLTSNYNKLATNAGAKVEGVEGMAQALQMIQQGRVDMTYNDKL 200
||||:||||||||||||..||||:||||||||:||:|||||.|:||||||
RBAM_003780__ 148 KGKTAAQSLTSNYNKLAKEAGAKIEGVEGMAQSLQLIQQGRADLTYNDKL 197
BSNT_00642___ 201 AVLNYLKTSGNKNVKIAFETGDPQSTYFTFRKGSGEVVDQVNKALKEMKE 250
|||||||||||||||||||.|.||.|||.|||||||:|..||||||||||
RBAM_003780__ 198 AVLNYLKTSGNKNVKIAFEAGQPQQTYFAFRKGSGELVTHVNKALKEMKE 247
BSNT_00642___ 251 DGTLSKISKKWFGEDVSK 268
|||||||:||||||||||
RBAM_003780__ 248 DGTLSKIAKKWFGEDVSK 265
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