Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00642 and RBAM_003780

See DNA alignment / Visit BSNT_00642 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:23
# Commandline: needle
#    -asequence pep-align/BSNT_00642___yckK.1.9828.seq
#    -bsequence pep-align/RBAM_003780___yckK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00642___yckK-RBAM_003780___yckK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00642___yckK-RBAM_003780___yckK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00642___yckK
# 2: RBAM_003780___yckK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 268
# Identity:     225/268 (84.0%)
# Similarity:   242/268 (90.3%)
# Gaps:           3/268 ( 1.1%)
# Score: 1149.5
# 
#
#=======================================

BSNT_00642___      1 MKKALLALFMVVSIAALAACGAGNDNQSKDNAKDGDLWASIKKKGVLTVG     50
                     |||||.||||:||||.|||||...|:.||  :||||||||:|||||||||
RBAM_003780__      1 MKKALFALFMMVSIAMLAACGNSQDSGSK--SKDGDLWASVKKKGVLTVG     48

BSNT_00642___     51 TEGTYEPFTYHDKDTDKLTGYDVEVITEVAKRLGLKVDFKETQWDSMFAG    100
                     |||||||||:|||.||||||||||||.|||||||||.|||||||||||||
RBAM_003780__     49 TEGTYEPFTFHDKKTDKLTGYDVEVIQEVAKRLGLKADFKETQWDSMFAG     98

BSNT_00642___    101 LNSKRFDVIANQVGKTDREDKYDFSDKYTTSRAVVVTKKDNNDIKSEADV    150
                     ||:|||||:|||||||.||::||||||||||.||||||||:. |..||||
RBAM_003780__     99 LNAKRFDVVANQVGKTGRENQYDFSDKYTTSNAVVVTKKDST-IAKEADV    147

BSNT_00642___    151 KGKTSAQSLTSNYNKLATNAGAKVEGVEGMAQALQMIQQGRVDMTYNDKL    200
                     ||||:||||||||||||..||||:||||||||:||:|||||.|:||||||
RBAM_003780__    148 KGKTAAQSLTSNYNKLAKEAGAKIEGVEGMAQSLQLIQQGRADLTYNDKL    197

BSNT_00642___    201 AVLNYLKTSGNKNVKIAFETGDPQSTYFTFRKGSGEVVDQVNKALKEMKE    250
                     |||||||||||||||||||.|.||.|||.|||||||:|..||||||||||
RBAM_003780__    198 AVLNYLKTSGNKNVKIAFEAGQPQQTYFAFRKGSGELVTHVNKALKEMKE    247

BSNT_00642___    251 DGTLSKISKKWFGEDVSK    268
                     |||||||:||||||||||
RBAM_003780__    248 DGTLSKIAKKWFGEDVSK    265


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