Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00680 and RBAM_004100
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:26
# Commandline: needle
# -asequence pep-align/BSNT_00680___ycnC.1.9828.seq
# -bsequence pep-align/RBAM_004100___ycnC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00680___ycnC-RBAM_004100___ycnC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00680___ycnC-RBAM_004100___ycnC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00680___ycnC
# 2: RBAM_004100___ycnC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 292
# Identity: 194/292 (66.4%)
# Similarity: 239/292 (81.8%)
# Gaps: 1/292 ( 0.3%)
# Score: 980.0
#
#
#=======================================
BSNT_00680___ 1 MLDKKTDILLAARKLFSEKDFTSVSMQAIAEECKMSKASIYKLFQSKEDL 50
|.|||||||||||||||.|.|:||||||||||||:||||:||||:|||||
RBAM_004100__ 1 MNDKKTDILLAARKLFSGKSFSSVSMQAIAEECKVSKASLYKLFESKEDL 50
BSNT_00680___ 51 LLELLSFNQKQMVAAASRLQENTALTPEERLTQKVKMELEGFRRNQQFFN 100
|||||.|||||||||||.|.|.|:|:||||..:|:..|||||||||||||
RBAM_004100__ 51 LLELLDFNQKQMVAAASLLNEETSLSPEERFAKKLMAELEGFRRNQQFFN 100
BSNT_00680___ 101 MLTYGNPKLHNDRVKQHIHQTRSTIICWHRDSLIQAYGETILPFVWDLVI 150
||.||:|...|:|||:|||:.|||.||||||||||.|||.|:|:||:|||
RBAM_004100__ 101 MLMYGSPSSINERVKRHIHRARSTFICWHRDSLIQTYGEDIIPYVWELVI 150
BSNT_00680___ 151 ILHGMMREFLMLIKIEEKPLELDPIAEFIISTLNQIIKNRETRQSLLPPE 200
:|.|::||.:.|||:|::||.|:|:.||||..||.|::|| |.::.||.|
RBAM_004100__ 151 VLQGLLRECITLIKLEKEPLALEPLTEFIIRHLNLIVENR-TTETALPQE 199
BSNT_00680___ 201 AIELYIHSASSYKPKDKSVLLSESLKELHKGISSLSAADYDVDELTSAAA 250
.|:|||.||||::||||:|||:||||||.:.:|:|....||...|.||||
RBAM_004100__ 200 MIDLYIASASSFEPKDKNVLLAESLKELKEAVSALPEEKYDAAGLASAAA 249
BSNT_00680___ 251 MLEEEAKKEEPRAFLLKSLIGYLEQTSVLTQPVSMLKTLLIT 292
|||:|:..::||.||:|:|||||||...|.||::.:||||..
RBAM_004100__ 250 MLEKESADKQPRDFLIKALIGYLEQAGPLHQPLAAVKTLLKL 291
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