Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00693 and RBAM_004200

See DNA alignment / Visit BSNT_00693 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:27
# Commandline: needle
#    -asequence pep-align/BSNT_00693___ycnJ.1.9828.seq
#    -bsequence pep-align/RBAM_004200___ycnJ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00693___ycnJ-RBAM_004200___ycnJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00693___ycnJ-RBAM_004200___ycnJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00693___ycnJ
# 2: RBAM_004200___ycnJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 542
# Identity:     364/542 (67.2%)
# Similarity:   440/542 (81.2%)
# Gaps:           1/542 ( 0.2%)
# Score: 1957.0
# 
#
#=======================================

BSNT_00693___      1 MKRNRWWIILLLFLVFLPKTSFAHAYIVKSSPGENSELKSAPAQVEIEFN     50
                     |::|:.|:|.|||||.:||||||||||..|:||||||||.||.|:|||||
RBAM_004200__      1 MRQNKRWLIFLLFLVLIPKTSFAHAYITNSNPGENSELKQAPKQIEIEFN     50

BSNT_00693___     51 EPVEEGFHYIKVFNSNGDRVDTDKTEIKKDNHHIMTVKLKKNLPHDVYRA    100
                     |.:|||||.|||:||:|:|||..||.|:|::..|||..||||||||:|||
RBAM_004200__     51 EQIEEGFHSIKVYNSSGERVDAGKTVIQKNDARIMTAALKKNLPHDIYRA    100

BSNT_00693___    101 EWNAVSADGHPVSGVIPFSIGKADGGFSSQKAADSALNPGTAADRAILYT    150
                     |||||||||||||||||||:|||.|....|.::.:||:|..|.||.||||
RBAM_004200__    101 EWNAVSADGHPVSGVIPFSVGKAGGELQEQTSSQAALHPEAAIDRGILYT    150

BSNT_00693___    151 ALSLFIGTVFFHLFWYK-GKSEQFVKRTRRILTGSIAALGLALLLQLPIQ    199
                     ||||||||.|||||||: .|.....|||.::|..|:...||||:.|||||
RBAM_004200__    151 ALSLFIGTAFFHLFWYRNNKDSSKAKRTVKLLVISLCVTGLALICQLPIQ    200

BSNT_00693___    200 TKANAGDGWGSAFQPGYIRETLFETAGGSIWIIQAALFVLLALSVIPAIR    249
                     ||.|||..|.:||||.|::|||.:||||.:|:||.:||:|||||:||.::
RBAM_004200__    201 TKENAGGAWSAAFQPDYVKETLLKTAGGYVWMIQTSLFILLALSMIPLLK    250

BSNT_00693___    250 KNRFSSFGYWIAPLIFFFGLLLAKAFTGHAAVVEEKTVGILMDFLHLTSA    299
                     |..|.||.||.|||:|||..||||||.|||||::||.|||.||||||::|
RBAM_004200__    251 KKAFRSFAYWTAPLLFFFASLLAKAFAGHAAVIDEKAVGIAMDFLHLSAA    300

BSNT_00693___    300 SIWVGGIAALVLLLSKEWRQPDKTLAWETVRRFSPWALTAVGVILFSGLL    349
                     |:|:|||||||||||.|||:.|||:||||||||||||..:|||:||||:|
RBAM_004200__    301 SVWMGGIAALVLLLSSEWRKTDKTIAWETVRRFSPWAFASVGVLLFSGVL    350

BSNT_00693___    350 NGFFIIRSMDSLFHTAYGQALLVKSGLFVFMLVLGAIHFLLTRKQRRTGI    399
                     |||||||:.|||||||||:.||:|.||||.||||||:|..:|:..|:..|
RBAM_004200__    351 NGFFIIRTFDSLFHTAYGKTLLLKIGLFVIMLVLGAVHVWITKFSRKRSI    400

BSNT_00693___    400 SRTLKAEWAIGIAVLITAAVFTSLPSPPEPAPEPFYQTKAIENGQSVSLS    449
                     |.|:|||||:|||||.|.||||||||||.|||.||..::.|.||:::||.
RBAM_004200__    401 SATIKAEWALGIAVLFTTAVFTSLPSPPPPAPLPFNGSETIGNGETLSLH    450

BSNT_00693___    450 ISPNQPGKNVFELRVTDHNGDPVKNIQQITLTVYKTGLSGSENKSTFTLK    499
                     |:|||||||.|::.||||||..||:|||.|:|||:||.||.:::|||.||
RBAM_004200__    451 ITPNQPGKNEFQVIVTDHNGSLVKDIQQFTVTVYQTGFSGKQHESTFDLK    500

BSNT_00693___    500 EKTKGVFQDQNLSINEKGNWKIKVHGLTGDFNEINIMFTKTN    541
                     :..:|.|:..||||.|||||||||||||.||||||.:|:.||
RBAM_004200__    501 KTKEGTFEAANLSITEKGNWKIKVHGLTNDFNEINQIFSTTN    542


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