Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00725 and RBAM_004370

See DNA alignment / Visit BSNT_00725 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:29
# Commandline: needle
#    -asequence pep-align/BSNT_00725___pbpC.1.9828.seq
#    -bsequence pep-align/RBAM_004370___pbpC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00725___pbpC-RBAM_004370___pbpC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00725___pbpC-RBAM_004370___pbpC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00725___pbpC
# 2: RBAM_004370___pbpC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 668
# Identity:     513/668 (76.8%)
# Similarity:   587/668 (87.9%)
# Gaps:           1/668 ( 0.1%)
# Score: 2755.0
# 
#
#=======================================

BSNT_00725___      1 MLKKCILLVFLCVGLIGLIGCSKTDSPEDRMEAFVKQWNDQQFDDMYQSL     50
                      :||.:.|:.|..|:|||||||||:|.||||:.|||.||...:|.|||||
RBAM_004370__      1 -MKKGLYLLLLLAGIIGLIGCSKTESAEDRMKDFVKDWNGGHYDKMYQSL     49

BSNT_00725___     51 TKDVKKEISKKDFVNRYKAIYEQAGVKNLKVTAGEVDKDDQDNKTMKHIP    100
                     |:|.||:.|||||:.||:.:|||||||||||||.:.|:||:....::||.
RBAM_004370__     50 TQDEKKKRSKKDFIKRYETVYEQAGVKNLKVTAEKQDEDDKKKDDLQHID     99

BSNT_00725___    101 YKVSMNTNAGKVSFKNTAVLKLEKTDDEESWNIDWDPSFIFKQLADDKTV    150
                     |||||:|.||||:|:||||||.|||||.|||||||:||||||||:|||||
RBAM_004370__    100 YKVSMDTKAGKVAFENTAVLKKEKTDDGESWNIDWNPSFIFKQLSDDKTV    149

BSNT_00725___    151 QIMSIEPKRGQIYDKNGKGLAVNTDVPEIGIVPGELGDKKEKVIKELAKK    200
                     ||.:.||||||||||:||||||||:||||||:||:||..|:.|||:|::|
RBAM_004370__    150 QIANEEPKRGQIYDKDGKGLAVNTEVPEIGIIPGKLGKDKDSVIKKLSEK    199

BSNT_00725___    201 LDLTEDDIKKKLDQGWVKDDSFVPLKKVKPDQEKLVSEATSLQGVTRTNV    250
                     |||:|||||.||:||||||||:|||:|::||.|..|....:|.|||:|.|
RBAM_004370__    200 LDLSEDDIKSKLNQGWVKDDSYVPLQKIRPDDESKVKSLLALDGVTKTKV    249

BSNT_00725___    251 SSRYYPYGEKTAHLTGYVRAITAEELKKKKEGTYSDTSNIGIAGLENVYE    300
                     ||||||||||.||||||::.||||:|||.|:|.|||||.|||||||||||
RBAM_004370__    250 SSRYYPYGEKAAHLTGYIKTITAEQLKKAKDGQYSDTSKIGIAGLENVYE    299

BSNT_00725___    301 DKLRGTTGWKIYVPQTGEVIAEKKAKDGEDLHLTIDIKTQTKLYDELKDD    350
                     |||||||||||||||||||||||||:.|:|:|:|||:||||||||.:|||
RBAM_004370__    300 DKLRGTTGWKIYVPQTGEVIAEKKAESGQDIHVTIDMKTQTKLYDSMKDD    349

BSNT_00725___    351 SGAAVALQPKTGETLALVSAPSYDPNGFIFGWSDKEWKKLNKDKNNPFSA    400
                     |||||||:|:|||||||||||||||||||||||.|||||||:||||||||
RBAM_004370__    350 SGAAVALEPQTGETLALVSAPSYDPNGFIFGWSGKEWKKLNEDKNNPFSA    399

BSNT_00725___    401 KFNKTYAPGSTIKPIAAAIGIKNGTLKADEKKTIKGKEWQKDSSWGGYSV    450
                     ||||.|||||||||||||:|:.||||||.|||.|.|||||||||||||.|
RBAM_004370__    400 KFNKLYAPGSTIKPIAAAVGLTNGTLKASEKKKITGKEWQKDSSWGGYHV    449

BSNT_00725___    451 TRVSERLQQVDLENALITSDNIYFAQNALDMGADTFTKGLKTFGFSEDVP    500
                     |||||||.:|||||||||||||||||||:|.|||.||||||||||.|::|
RBAM_004370__    450 TRVSERLNEVDLENALITSDNIYFAQNAIDAGADAFTKGLKTFGFDEEIP    499

BSNT_00725___    501 YEFPIQKSSIANDKLDSDILLADTGYGQGQMQMSPLHLATAYTPFVDNGD    550
                     |:|||:||||||.||||:|||.|||||||||.|||||||..||.||.:|:
RBAM_004370__    500 YQFPIEKSSIANGKLDSEILLGDTGYGQGQMLMSPLHLAADYTAFVTDGN    549

BSNT_00725___    551 LVKPTLIKKDSQTADVWHKQVVTKEGAADITKGLKGVVEDERGSAYQPVV    600
                     ||||||||...:|..:||||||:|..|.:|||||:|||||.|||||||.|
RBAM_004370__    550 LVKPTLIKDGEKTPQIWHKQVVSKANAEEITKGLRGVVEDPRGSAYQPAV    599

BSNT_00725___    601 KGITVAGKTGTAELKTSKDDKDGTENGWFVGYDYKNKDLLVAMMIQNVQD    650
                     .|||||||||||||||||:||||.|||||||||||.||||:|||||:|:.
RBAM_004370__    600 SGITVAGKTGTAELKTSKEDKDGKENGWFVGYDYKKKDLLIAMMIQDVKK    649

BSNT_00725___    651 RGGSHYVVEKAKKQFQSN    668
                     ||||||||||||||||::
RBAM_004370__    650 RGGSHYVVEKAKKQFQNH    667


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