Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00741 and RBAM_004480

See DNA alignment / Visit BSNT_00741 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:31
# Commandline: needle
#    -asequence pep-align/BSNT_00741___topB.1.9828.seq
#    -bsequence pep-align/RBAM_004480___topB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00741___topB-RBAM_004480___topB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00741___topB-RBAM_004480___topB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00741___topB
# 2: RBAM_004480___topB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 728
# Identity:     662/728 (90.9%)
# Similarity:   697/728 (95.7%)
# Gaps:           1/728 ( 0.1%)
# Score: 3435.0
# 
#
#=======================================

BSNT_00741___      1 MSKTVVLAEKPSVGRDLARVLKCHKKGNGYLEGDQYIVTWALGHLVTLAD     50
                     ||||||||||||||||||||||||||||||||||:|||||||||||||||
RBAM_004480__      1 MSKTVVLAEKPSVGRDLARVLKCHKKGNGYLEGDRYIVTWALGHLVTLAD     50

BSNT_00741___     51 PEGYGKEFQSWRLEDLPIIPEPLKLVVIKKTGKQFNAVKSQLTRKDVNQI    100
                     |||||||||||||||||||||||||||||||||||||||:||.||||.||
RBAM_004480__     51 PEGYGKEFQSWRLEDLPIIPEPLKLVVIKKTGKQFNAVKAQLVRKDVTQI    100

BSNT_00741___    101 VIATDAGREGELVARWIIEKANVRKPIKRLWISSVTDKAIKEGFQKLRSG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_004480__    101 VIATDAGREGELVARWIIEKANVRKPIKRLWISSVTDKAIKEGFQKLRSG    150

BSNT_00741___    151 KEYENLYHSAVARAEADWIVGINATRALTTKFNAQLSCGRVQTPTLAMIA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_004480__    151 KEYENLYHSAVARAEADWIVGINATRALTTKFNAQLSCGRVQTPTLAMIA    200

BSNT_00741___    201 KREADIQAFTPVPYYGIRAVVDGMTLTWQDKKSKQTRTFNQDVTSRLLKN    250
                     |||||||||.||||||:||..|.|||||||||:||||||:|.||.||.|:
RBAM_004480__    201 KREADIQAFKPVPYYGLRAAADQMTLTWQDKKTKQTRTFDQTVTGRLAKD    250

BSNT_00741___    251 LQGKQAVVAELKKTAKKSFAPALYDLTELQRDAHKRFGFSAKETLSVLQK    300
                     ||||.||::||||||||||||.||||||||||||||||||||||||||||
RBAM_004480__    251 LQGKPAVISELKKTAKKSFAPGLYDLTELQRDAHKRFGFSAKETLSVLQK    300

BSNT_00741___    301 LYEQHKLVTYPRTDSRFLSSDIIPTLKDRLEGMEVKPYAQYVSQIKKRGI    350
                     |||||||||||||||||||:||:|||||||.|||||||||||:||.|||:
RBAM_004480__    301 LYEQHKLVTYPRTDSRFLSADIVPTLKDRLNGMEVKPYAQYVNQILKRGV    350

BSNT_00741___    351 KSHKGYVNDAKVSDHHAIIPTEEPLVLSSLSDKERKLYDLIAKRFLAVLM    400
                     |:|||:|||||||||||||||||||:||||||||||||||||||||||||
RBAM_004480__    351 KAHKGFVNDAKVSDHHAIIPTEEPLILSSLSDKERKLYDLIAKRFLAVLM    400

BSNT_00741___    401 PAFEYEETKVIAEIGGETFRAKGKTVQSQGWKAVYDMADEDDEQEDDRDQ    450
                     ||||||||||.|:||||||.||||||||.||||||||.::||:.|:|:||
RBAM_004480__    401 PAFEYEETKVTADIGGETFTAKGKTVQSPGWKAVYDMYEDDDDHEEDKDQ    450

BSNT_00741___    451 TLPALQKGDTLAVRTLTETSGQTKPPARFNEGTLLSAMENPSAFMQGEEK    500
                     |||.||:|..|.|.:|.|||||||||||||||||||||||||||||||||
RBAM_004480__    451 TLPDLQQGQRLTVSSLKETSGQTKPPARFNEGTLLSAMENPSAFMQGEEK    500

BSNT_00741___    501 GLVKTLGETGGLGTVATRADIIEKLFNSFLIEKKGQDIFITSKGKQLLQL    550
                     .|||||||||||||||||||||||||||||||||.:||||||||||||||
RBAM_004480__    501 NLVKTLGETGGLGTVATRADIIEKLFNSFLIEKKEKDIFITSKGKQLLQL    550

BSNT_00741___    551 VPEDLKSPALTAEWEQKLSAIAAGKLKSAVFIKDMKAYAHQTVKEIKNSS    600
                     ||||||||||||||||||||||||||||||||||||.||.:|||||||||
RBAM_004480__    551 VPEDLKSPALTAEWEQKLSAIAAGKLKSAVFIKDMKTYAGKTVKEIKNSS    600

BSNT_00741___    601 QTFRHDNITGTACPECGKMMLKVNGKRGTMLVCQDRECGSRKTIARKTNA    650
                     ||||||||:|||||:||||||||||||||||||||||||||||:||||||
RBAM_004480__    601 QTFRHDNISGTACPDCGKMMLKVNGKRGTMLVCQDRECGSRKTLARKTNA    650

BSNT_00741___    651 RCPNCHKRMELRGQGEGQTFACVCGHREKLSVFEKRKNKDKA-RATKRDV    699
                     |||||||:|||||||||||||||||||||||||||||.|||: ||:|||:
RBAM_004480__    651 RCPNCHKKMELRGQGEGQTFACVCGHREKLSVFEKRKAKDKSGRASKRDI    700

BSNT_00741___    700 SSYMKKQNKDEPINNALAEQLKKLGLDK    727
                     :||||.|||:||:|||||||||||||||
RBAM_004480__    701 NSYMKSQNKEEPMNNALAEQLKKLGLDK    728


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