Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00768 and RBAM_004810

See DNA alignment / Visit BSNT_00768 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:33
# Commandline: needle
#    -asequence pep-align/BSNT_00768___ydbI.1.9828.seq
#    -bsequence pep-align/RBAM_004810___ydbI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00768___ydbI-RBAM_004810___ydbI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00768___ydbI-RBAM_004810___ydbI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00768___ydbI
# 2: RBAM_004810___ydbI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 351
# Identity:     293/351 (83.5%)
# Similarity:   319/351 (90.9%)
# Gaps:           3/351 ( 0.9%)
# Score: 1487.0
# 
#
#=======================================

BSNT_00768___      1 MAALVKFFQHPGVRRFSIFVVLTGVLYLFKSMINLILLTFIFTFLMDRLE     50
                     |||:.||||||||||||:|:||||||.:|:||||||||||||||||||||
RBAM_004810__      1 MAAIFKFFQHPGVRRFSVFLVLTGVLVVFRSMINLILLTFIFTFLMDRLE     50

BSNT_00768___     51 LVVRQFVSRFFRVSQRVVITFLYILLAVLLTVGGFVFYPVVAAQIQQLVK    100
                     .|:|..::.|||:|||||||.|||.|||..|||||||||:||.||:||:|
RBAM_004810__     51 TVIRHVLNHFFRISQRVVITVLYIALAVGATVGGFVFYPIVAKQIEQLIK    100

BSNT_00768___    101 QIKHIAYHPDSIPFFDEITSVFGDINISSYVKEGFNVVYTYLADISTFGL    150
                     ||||||||||.|||:|||:||||||||.|||||||||:||||||||||||
RBAM_004810__    101 QIKHIAYHPDVIPFYDEISSVFGDINIGSYVKEGFNVLYTYLADISTFGL    150

BSNT_00768___    151 QVVMALILSMFFLFEKKRLSEFMAKFKTSKLRVFYEEIAFFGSKFARTFG    200
                     ||||:||||||||||||||:|||.||:.|||.|||.|:|:||||||||||
RBAM_004810__    151 QVVMSLILSMFFLFEKKRLTEFMKKFQHSKLSVFYYELAYFGSKFARTFG    200

BSNT_00768___    201 KVLEAQFIIALVNCILTFIALWIMHFPQLFGLSIMVFFLGLIPVAGVVIS    250
                     |||||||||||||||||.|||.|:||||||||||||||||||||||||||
RBAM_004810__    201 KVLEAQFIIALVNCILTLIALAILHFPQLFGLSIMVFFLGLIPVAGVVIS    250

BSNT_00768___    251 LIPLSIIAYSTGGGMYVLYIVLVIFAIHAIETYFLNPKLMSAKTELPIFF    300
                     |||||||||:|||..||:|||||||.||||||||||||||||||||||||
RBAM_004810__    251 LIPLSIIAYTTGGAAYVIYIVLVIFVIHAIETYFLNPKLMSAKTELPIFF    300

BSNT_00768___    301 TFTVLIFSEHFFGIWGLIIGIPIFVFLLDILDVTNKEDRSK-GPRENSDK    349
                     |||||||||||||||||||||||||||||||||.|.|::.| ||..:.. 
RBAM_004810__    301 TFTVLIFSEHFFGIWGLIIGIPIFVFLLDILDVVNNEEKEKNGPVPDKT-    349

BSNT_00768___    350 K    350
                      
RBAM_004810__    349 -    349


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