Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00772 and RBAM_004830

See DNA alignment / Visit BSNT_00772 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:33
# Commandline: needle
#    -asequence pep-align/BSNT_00772___ydbK.1.9828.seq
#    -bsequence pep-align/RBAM_004830___ydbK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00772___ydbK-RBAM_004830___ydbK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00772___ydbK-RBAM_004830___ydbK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00772___ydbK
# 2: RBAM_004830___ydbK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 255
# Identity:     190/255 (74.5%)
# Similarity:   221/255 (86.7%)
# Gaps:           0/255 ( 0.0%)
# Score: 996.0
# 
#
#=======================================

BSNT_00772___      1 MSKLIWNEHMKLFNRKVTLVSLILMAVFQFFMALIIKRIVISAGTDENFI     50
                     |.||..|||||||||||:||:||||||.||.|||:|||:|||:|||||||
RBAM_004830__      1 MFKLTANEHMKLFNRKVSLVALILMAVLQFIMALVIKRLVISSGTDENFI     50

BSNT_00772___     51 GYLSYTPSLNILLQALTIVIAATIVSMEFDKKTIKFLLIRPVKRQKVFWS    100
                     ||::|.|.|||||:||||||||||:|.|||||||||||||||||:::|.|
RBAM_004830__     51 GYMAYAPGLNILLEALTIVIAATIISAEFDKKTIKFLLIRPVKRERIFVS    100

BSNT_00772___    101 KLITVVMVSFYLYLAYYILALLFGLVFFGTSVTAESKTLLVNTLALIGSN    150
                     |||||.:||.|||.|||||:||||:.|||.|||:||.|||:|||.:||:|
RBAM_004830__    101 KLITVFLVSLYLYAAYYILSLLFGMAFFGVSVTSESGTLLMNTLKVIGTN    150

BSNT_00772___    151 WLEAVMMGLFGLLCSSLFRNSAVAVVVSFVVLYGASTLVQLMKLFENKWG    200
                     |:||..|..|||||||:|||||.||::||:|||||.:||.:|.||:||||
RBAM_004830__    151 WVEAFAMACFGLLCSSVFRNSATAVILSFIVLYGAKSLVTIMSLFQNKWG    200

BSNT_00772___    201 SFLLFANTDFTQYGSGETALFSGMTPLFSIGILIIHAIFFIVVGWWCFCK    250
                     |||||||||.|||.||...||:|||||||.||:|||.:||:.|.||.|||
RBAM_004830__    201 SFLLFANTDLTQYMSGAKPLFAGMTPLFSAGIIIIHIVFFLAVAWWSFCK    250

BSNT_00772___    251 RDVRV    255
                     |||||
RBAM_004830__    251 RDVRV    255


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