Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00783 and RBAM_004900
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:33
# Commandline: needle
# -asequence pep-align/BSNT_00783___ddl.1.9828.seq
# -bsequence pep-align/RBAM_004900___ddl.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00783___ddl-RBAM_004900___ddl.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00783___ddl-RBAM_004900___ddl.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00783___ddl
# 2: RBAM_004900___ddl
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 361
# Identity: 305/361 (84.5%)
# Similarity: 329/361 (91.1%)
# Gaps: 7/361 ( 1.9%)
# Score: 1606.0
#
#
#=======================================
BSNT_00783___ 1 MKTSLGLVYGGKSAEHNVSLQTALAVIKALNTEKFDIHPIYITEKGEWVR 50
:||||||||||||||||||.|||||||||||||||||||||.|
RBAM_004900__ 1 -------MYGGKSAEHNVSLQTALAVTKALNTEKFDIHPIYITEKGEWQR 43
BSNT_00783___ 51 GARLTEPVSNVKMLQFEQGGSAFSPAALNQEMFPQEASQQNEAIDVVFPL 100
|..||||||||||||.||.|.:|:.:|||:||||:.:..:...|||||||
RBAM_004900__ 44 GPLLTEPVSNVKMLQLEQNGESFALSALNREMFPEASPDEKAPIDVVFPL 93
BSNT_00783___ 101 LHGPNGEDGTIQGMLELLNIPYVGNGVLASSAGMDKVVMKHLFAQAGLAQ 150
|||||||||||||:|||||:|||||||||||||||||:||||||||||.|
RBAM_004900__ 94 LHGPNGEDGTIQGLLELLNVPYVGNGVLASSAGMDKVIMKHLFAQAGLPQ 143
BSNT_00783___ 151 AKYAAFLKKDWTRSPKESCEQVEQELGYPCFVKPANLGSSVGISKCRNRE 200
|||||||||||.::|....:|||:||||||||||||||||||||||||||
RBAM_004900__ 144 AKYAAFLKKDWKQTPDSCLQQVEKELGYPCFVKPANLGSSVGISKCRNRE 193
BSNT_00783___ 201 ELQKAFELAFQYDRKVVVEEGINGREIEIGVLGNDDPKCSVVGEIAPKTD 250
||:|||||||:||||:||||||.||||||||||||:||||.|||||||||
RBAM_004900__ 194 ELEKAFELAFEYDRKIVVEEGIAGREIEIGVLGNDEPKCSAVGEIAPKTD 243
BSNT_00783___ 251 FYDYKAKYEDGDTDLMIPAIVTDEEYATISDMAIKAFKAIDGSGLVRADF 300
|||||||||||||||||||.||||:||.||:|||||||||||||||||||
RBAM_004900__ 244 FYDYKAKYEDGDTDLMIPAQVTDEQYAEISEMAIKAFKAIDGSGLVRADF 293
BSNT_00783___ 301 FLTADGEVLINEVNTMPGFTPFSMFPLLWKEAGVEYADLIEQLVELAKER 350
|||.||:|||||||||||||||||||||||||||:|:|||||||||||||
RBAM_004900__ 294 FLTNDGQVLINEVNTMPGFTPFSMFPLLWKEAGVDYSDLIEQLVELAKER 343
BSNT_00783___ 351 HAEKQLIKHTF 361
|||||||||||
RBAM_004900__ 344 HAEKQLIKHTF 354
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