Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00791 and RBAM_004950
See
DNA alignment /
Visit
BSNT_00791 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:34
# Commandline: needle
# -asequence pep-align/BSNT_00791___ydcA.1.9828.seq
# -bsequence pep-align/RBAM_004950___ydcA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00791___ydcA-RBAM_004950___ydcA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00791___ydcA-RBAM_004950___ydcA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00791___ydcA
# 2: RBAM_004950___ydcA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 199
# Identity: 154/199 (77.4%)
# Similarity: 176/199 (88.4%)
# Gaps: 0/199 ( 0.0%)
# Score: 836.0
#
#
#=======================================
BSNT_00791___ 1 MFIRTENFQTFIRLYPVVTFILALQAVLWLFFSLPAHSVVLWRDTVTGYN 50
|||||||||||||.||.|:.||||||.||||||:|.|||::|.|.|||||
RBAM_004950__ 1 MFIRTENFQTFIRRYPAVSCILALQAFLWLFFSMPLHSVMMWSDAVTGYN 50
BSNT_00791___ 51 LGVANGEWWRLITPILLHAGFTHLLFNSMSIFLFAPALERMLGKAHFLLV 100
.||::||||||:||:.|||.||||||||||:|||||.||:||||..||:|
RBAM_004950__ 51 YGVSSGEWWRLVTPMFLHANFTHLLFNSMSLFLFAPPLEQMLGKVRFLIV 100
BSNT_00791___ 101 YAGSGIIGNIGTYVTEPLDYVHVGASGAIFGLFGVYLFMVLFRNELIGQE 150
|..||||||||||:.|||||||||||||||||||||:|:.:||.||||::
RBAM_004950__ 101 YIASGIIGNIGTYLAEPLDYVHVGASGAIFGLFGVYVFLTVFRKELIGRD 150
BSNT_00791___ 151 HSKMIITLLAFAVLMSFINSNINMMAHLFGLCGGFLLSFLCVQKKERRY 199
.||||:|||..|||.:|||||||:|||||||.|||||||||||:|:|||
RBAM_004950__ 151 QSKMIMTLLIIAVLSTFINSNINIMAHLFGLAGGFLLSFLCVQQKKRRY 199
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.