Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00793 and RBAM_004970

See DNA alignment / Visit BSNT_00793 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:34
# Commandline: needle
#    -asequence pep-align/BSNT_00793___ydcC.1.9828.seq
#    -bsequence pep-align/RBAM_004970___ydcC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00793___ydcC-RBAM_004970___ydcC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00793___ydcC-RBAM_004970___ydcC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00793___ydcC
# 2: RBAM_004970___ydcC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 373
# Identity:     297/373 (79.6%)
# Similarity:   319/373 (85.5%)
# Gaps:          38/373 (10.2%)
# Score: 1539.0
# 
#
#=======================================

BSNT_00793___      1 MRLLWYASVLPKRVPSVPLKSNKRFLPFTSIEKKGLKKVRKSFVLLLTGL     50
                                                           :|||||||||||
RBAM_004970__      1 --------------------------------------MRKSFVLLLTGL     12

BSNT_00793___     51 LAVLILSACGQKTQQDIVAGLDEKAKEYTSYKAKAKMTIETGSEPQVYNV    100
                     ||||||||||||:|:|||.|||:||||||||||||||||||||:||||||
RBAM_004970__     13 LAVLILSACGQKSQEDIVNGLDKKAKEYTSYKAKAKMTIETGSDPQVYNV     62

BSNT_00793___    101 EIWHKKPSLYRVYLENPKKDQNQVILRNENGVFVLTPSLNKSFRFQSDWP    150
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
RBAM_004970__     63 EIWHKKPSLYRVYLENPKKDQNQVILRNANGVFVLTPSLNKSFRFQSDWP    112

BSNT_00793___    151 NNSSQVYLFESLVKDVQNDSDAVFTAKEKKYVFETKTNYQHNKMLPTQEI    200
                     |||||||||||||||||:|.|||::||:|||.||||||||||||||||||
RBAM_004970__    113 NNSSQVYLFESLVKDVQHDKDAVYSAKDKKYTFETKTNYQHNKMLPTQEI    162

BSNT_00793___    201 TFNKKDMSPSSVKVMDTDRKVMVKVEFSSFEFNKQFDKESFDEKKNMTLS    250
                     ||||||||||.||||||||||||||||.||||||.|||:|||||||||||
RBAM_004970__    163 TFNKKDMSPSLVKVMDTDRKVMVKVEFKSFEFNKPFDKDSFDEKKNMTLS    212

BSNT_00793___    251 QMDVATSAKPSDTFAVKTPLELPLGVKLLEEKDISTEDGKRIIMTYGGEK    300
                     ||||||||||||:|||||||::|.|||.||||||||.|||||:|||||||
RBAM_004970__    213 QMDVATSAKPSDSFAVKTPLQVPAGVKKLEEKDISTADGKRIVMTYGGEK    262

BSNT_00793___    301 SFTLIQEKAQIAKASSSVTLNGEPVNLGYTIGALSDASLSWTYDGVDYLL    350
                     |||||||||.||||:|:|||.|||||||:|:.||||.||:||||||||||
RBAM_004970__    263 SFTLIQEKAHIAKAASAVTLKGEPVNLGFTVAALSDTSLTWTYDGVDYLL    312

BSNT_00793___    351 SSKDLSKEEMVTVAKSMQGQSSK    373
                     ||:||:|:|||..||||||||||
RBAM_004970__    313 SSQDLTKDEMVAAAKSMQGQSSK    335


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