Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00794 and RBAM_004980

See DNA alignment / Visit BSNT_00794 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:34
# Commandline: needle
#    -asequence pep-align/BSNT_00794___alr.1.9828.seq
#    -bsequence pep-align/RBAM_004980___alr.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00794___alr-RBAM_004980___alr.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00794___alr-RBAM_004980___alr.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00794___alr
# 2: RBAM_004980___alr
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 389
# Identity:     321/389 (82.5%)
# Similarity:   344/389 (88.4%)
# Gaps:           0/389 ( 0.0%)
# Score: 1664.0
# 
#
#=======================================

BSNT_00794___      1 MSTKPFYRDTWAEIDLSAIKENVSNMKKHIGEHVHLMAVVKANAYGHGDA     50
                     |:|..|||:|||||:||||||||::||||||::||||||||||||||||.
RBAM_004980__      1 MNTASFYRETWAEINLSAIKENVTHMKKHIGQNVHLMAVVKANAYGHGDL     50

BSNT_00794___     51 ETAKAALDAGASCLAVAILDEAISLRKKGLKAPILVLGAVPPEYVAIAAE    100
                     |..||||:|||||||||||||||||||:|:.||||||||||||||..|||
RBAM_004980__     51 EVGKAALEAGASCLAVAILDEAISLRKRGITAPILVLGAVPPEYVQAAAE    100

BSNT_00794___    101 YDVTLTGYSVEWLQEAARHTKKGYLHFHLKVDTGMNRLGVKTEEEVQNVM    150
                     |||||||||||||||||||.....:.|||||||||||||||||||:|:|:
RBAM_004980__    101 YDVTLTGYSVEWLQEAARHLGSATVPFHLKVDTGMNRLGVKTEEEIQSVL    150

BSNT_00794___    151 AILDRNPRLKCKGVFTHFATADEKERGYFLMQFERFKELIAPLPLKNLMV    200
                     .||.:||.|.||||||||||||||.|.|||.||:|||.||||||||.|||
RBAM_004980__    151 KILSQNPGLVCKGVFTHFATADEKNRDYFLFQFDRFKTLIAPLPLKELMV    200

BSNT_00794___    201 HCANSAAGLRLKKGFFNAVRFGIGMYGLRPSADISDEIPFQLRPAFTLHS    250
                     |||||||||||||||||||||||.||||||||||..||||||:|||.|||
RBAM_004980__    201 HCANSAAGLRLKKGFFNAVRFGISMYGLRPSADIQSEIPFQLKPAFALHS    250

BSNT_00794___    251 TLSHVKLIRKGESVSYGAEYTAEKDTWIGTVPVGYADGWLRKLKGTDILV    300
                     .|||||.|||||||||||.||||||.||||||:||||||||||.||.:|:
RBAM_004980__    251 VLSHVKKIRKGESVSYGATYTAEKDQWIGTVPIGYADGWLRKLSGTSVLI    300

BSNT_00794___    301 KGKRLKIAGRICMDQFMVELDQEYPPGTKVTLIGRQGDEYISMDEIAGRL    350
                     .|||:.|||||||||.||||||.|||||||||||.|.:|.|:||||||||
RBAM_004980__    301 GGKRMNIAGRICMDQLMVELDQSYPPGTKVTLIGSQKEETITMDEIAGRL    350

BSNT_00794___    351 ETINYEVACTISSRVPRMFLENGSIMEVRNPLLQVNTSN    389
                     .||||||.||||||||||||||.|||||||||||.|||.
RBAM_004980__    351 GTINYEVPCTISSRVPRMFLENESIMEVRNPLLQDNTSK    389


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