Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00803 and RBAM_005060

See DNA alignment / Visit BSNT_00803 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:35
# Commandline: needle
#    -asequence pep-align/BSNT_00803___rsbW.1.9828.seq
#    -bsequence pep-align/RBAM_005060___rsbW.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00803___rsbW-RBAM_005060___rsbW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00803___rsbW-RBAM_005060___rsbW.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00803___rsbW
# 2: RBAM_005060___rsbW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 160
# Identity:     141/160 (88.1%)
# Similarity:   153/160 (95.6%)
# Gaps:           0/160 ( 0.0%)
# Score: 752.0
# 
#
#=======================================

BSNT_00803___      1 MKNNADYIEMKVPAQPEYVGIIRLTLSGVASRMGYTYDEIEDLKIAVSEA     50
                     |..:.||||||:||:||||||:||||||||||||||||:|||||||||||
RBAM_005060__      1 MSTSVDYIEMKIPAEPEYVGIVRLTLSGVASRMGYTYDDIEDLKIAVSEA     50

BSNT_00803___     51 CTNAVQHAYKEDKNGEVSIRFGVFEDRLEVIVADEGDSFDFDQKQQDLGP    100
                     |||||||||.::..||||:|||||||||||||||:|||||||||||||||
RBAM_005060__     51 CTNAVQHAYNDENKGEVSVRFGVFEDRLEVIVADQGDSFDFDQKQQDLGP    100

BSNT_00803___    101 YTPSHTVDQLSEGGLGLYLMETLMDEVRVQNHSGVTVAMTKYLNGERVDH    150
                     |||||||||||||||||||||||||||:||::||||||||||||||||||
RBAM_005060__    101 YTPSHTVDQLSEGGLGLYLMETLMDEVKVQSNSGVTVAMTKYLNGERVDH    150

BSNT_00803___    151 DTTIKNYETN    160
                     .|||||||||
RBAM_005060__    151 GTTIKNYETN    160


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.